RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ACP6Q9NPH0 428 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 NDFIP2Q9NV92 336 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 OR12D3Q9UGF7 316 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 DNAI1Q9UI46 699 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 ATP8A1Q9Y2Q0 1164 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 OAS3Q9Y6K5 1087 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 LRCH4O75427 683 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 CREG1O75629 220 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 FUCA1P04066 466 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 ERCC5P28715 1186 aaPredicted RBP11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 GRNP28799 593 aaKnown RBP11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 CTBSQ01459 385 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 MRPL49Q13405 166 aaKnown RBP11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 NAA30Q147X3 362 aaPredicted RBP11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 NADK2Q4G0N4 442 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 PTPN20Q4JDL3 420 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 CFAP58Q5T655 872 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 MANEALQ5VSG8 457 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 AFMIDQ63HM1 303 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 LIPIQ6XZB0 460 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 PATE1Q8WXA2 126 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 THAP4Q8WY91 577 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 TUBGCP5Q96RT8 1024 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 NCAPGQ9BPX3 1015 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 TEX101Q9BY14 249 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 APMAPQ9HDC9 416 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 CROTQ9UKG9 612 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
AMBRA1-207ENST00000529553 LRP4O75096 1905 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 CDC14CA4D256 554 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 A8MU76 341 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 INSIG1O15503 277 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 TEX33O43247 280 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 ELFN1P0C7U0 828 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 AK4P27144 223 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 KRT9P35527 623 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 GABRB2P47870 512 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 NDST2P52849 883 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 PTK2Q05397 1052 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 CCDC40Q4G0X9 1142 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 RWDD4Q6NW29 188 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 SLC30A9Q6PML9 568 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 ARCQ7LC44 396 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 SLC47A2Q86VL8 602 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 GSDMAQ96QA5 445 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 SLC25A23Q9BV35 468 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 FRMD8Q9BZ67 464 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 ULBP3Q9BZM4 244 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 PHPT1Q9NRX4 125 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 ENTPD4Q9Y227 616 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 ZNF451Q9Y4E5 1061 aa11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-207ENST00000529553 GOLGA6L3A6NEY3 463 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 BECN2A8MW95 431 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 C21orf140B9A014 251 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 KATNA1O75449 491 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 PIGNO95427 931 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 CBX6O95503 412 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 IVLP07476 585 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ANKRD34CP0C6C1 535 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 TEAD1P28347 426 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ADRA1BP35368 520 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ADCY8P40145 1251 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 GNPDA1P46926 289 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 CSNK1DP48730 415 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 YBEYP58557 167 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 IL11RAQ14626 422 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 CYTH1Q15438 398 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SNAP47Q5SQN1 464 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 JMJD6Q6NYC1 403 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 DPPA4Q7L190 304 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 TMEM135Q86UB9 458 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 FAM131BQ86XD5 332 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SFRP1Q8N474 314 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 NCSTNQ92542 709 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 MARVELD3Q96A59 401 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SH3KBP1Q96B97 665 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 C18orf8Q96DM3 657 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SCARF2Q96GP6 870 aaPredicted RBP11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 ZMYND15Q9H091 742 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 EPB41L1Q9H4G0 881 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SLAMF7Q9NQ25 335 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 LHX3Q9UBR4 397 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 PADI1Q9ULC6 663 aa11.6□□□□□ -0.55
AMBRA1-207ENST00000529553 SUFUQ9UMX1 484 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms