RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 KCTD5Q9NXV2 234 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 DNPEPQ9ULA0 475 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PCDHA13Q9Y5I0 950 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 LRRK1Q38SD2 2015 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 COL5A1P20908 1838 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 GOLGA4Q13439 2230 aaKnown RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TRABD2BA6NFA1 517 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 B4DGG1 531 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PSTPIP1O43586 416 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 HEXIM1O94992 359 aaKnown RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 MT-CO3P00414 261 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TSHRP16473 764 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 CES1P23141 567 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 ACP1P24666 158 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 ETV3P41162 512 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 GNPDA1P46926 289 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 HK3P52790 923 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 CYP4F3Q08477 520 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 RALGDSQ12967 914 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TPRG1LQ5T0D9 272 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 LRRC66Q68CR7 880 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 NPNTQ6UXI9 565 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 B4GALNT4Q76KP1 1039 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 LAPTM4BQ86VI4 370 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 HEATR4Q86WZ0 1026 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TMTC1Q8IUR5 882 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PLA2G15Q8NCC3 412 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TPCN2Q8NHX9 752 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 AP2M1Q96CW1 435 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 HDAC11Q96DB2 347 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 ECHDC3Q96DC8 303 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PDXPQ96GD0 296 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 RBM41Q96IZ5 413 aaKnown RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 DEPDC7Q96QD5 511 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 LGMNQ99538 433 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 LRRC61Q9BV99 259 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 ADGRE3Q9BY15 652 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 DPEP2Q9H4A9 486 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 CARS2Q9HA77 564 aaKnown RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 USP29Q9HBJ7 922 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PCDH9Q9HC56 1237 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 DTLQ9NZJ0 730 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PKD2L2Q9NZM6 624 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 KLHL8Q9P2G9 620 aaPredicted RBP9.09□□□□□ -0.95
CMTM1-210ENST00000528441 NENFQ9UMX5 172 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 TFR2Q9UP52 801 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 GPR34Q9UPC5 381 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 GPSM3Q9Y4H4 160 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 CSNK1G3Q9Y6M4 447 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 PTPRBP23467 1997 aa9.09□□□□□ -0.95
CMTM1-210ENST00000528441 C1orf232A0A0U1RR37 186 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 CFAP69A5D8W1 941 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 NPIPB15A6NHN6 443 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 F5H423 210 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 H7C0C1 242 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 AGRPO00253 132 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 TRAFD1O14545 582 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 INPP4BO15327 924 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 HTRA2O43464 458 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 CST8O60676 142 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 KRT37O76014 449 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ZRANB2O95218 330 aaKnown RBP eCLIP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 CKMT1AP12532 417 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 IL4RP24394 825 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ATP5OP48047 213 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ARSEP51690 589 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 KIAA1024LP59773 190 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ILF3Q12906 894 aaKnown RBP eCLIP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 TBX2Q13207 712 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 SPIDRQ14159 915 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 GALNT3Q14435 633 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 SMAD1Q15797 465 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ALG11Q2TAA5 492 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ALS2CLQ60I27 953 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 PNCKQ6P2M8 343 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 GUSBP11Q6P575 273 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 MFSD7Q6UXD7 560 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 LRRC69Q6ZNQ3 347 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 MARK2Q7KZI7 788 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 TSPAN33Q86UF1 283 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 PQLC3Q8N755 202 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 FAM46DQ8NEK8 389 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 TFB1MQ8WVM0 346 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 P3H4Q92791 437 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 NAT6Q93015 286 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 WNT2BQ93097 391 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 FUBP1Q96AE4 644 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 MRFAP1L1Q96HT8 127 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 RBM15Q96T37 977 aaKnown RBP eCLIP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 MLPHQ9BV36 600 aaPredicted RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 TDRD1Q9BXT4 1180 aaKnown RBP9.08□□□□□ -0.96
CMTM1-210ENST00000528441 GSDMCQ9BYG8 508 aa9.08□□□□□ -0.96
CMTM1-210ENST00000528441 MRPL40Q9NQ50 206 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms