RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 INSM1Q01101 510 aaPredicted RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 RALGDSQ12967 914 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 TFDP2Q14188 446 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 RTP5Q14D33 572 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 C6orf132Q5T0Z8 1188 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 ALG1LQ6GMV1 187 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 RD3Q7Z3Z2 195 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 HID1Q8IV36 788 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 CCDC13Q8IYE1 715 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 NRSN1Q8IZ57 195 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 PGBD5Q8N414 524 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 DCBLD1Q8N8Z6 715 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 OR56A4Q8NGH8 313 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 RAPGEF5Q92565 580 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 COQ10AQ96MF6 247 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 SRPK1Q96SB4 655 aaKnown RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 BOCQ9BWV1 1114 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 ADGRE3Q9BY15 652 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 PHPT1Q9NRX4 125 aaPredicted RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 SPTLC3Q9NUV7 552 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 B4GALT6Q9UBX8 382 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 KLQ9UEF7 1012 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 KLF15Q9UIH9 416 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.62□□□□□ -0.87
CHD7-208ENST00000528280 AK5Q9Y6K8 562 aa9.62□□□□□ -0.87
CHD7-208ENST00000528280 TP53BP1Q12888 1972 aaPredicted RBP9.62□□□□□ -0.87
CHD7-208ENST00000528280 TDRD6O60522 2096 aaKnown RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 A0A0A6YYK5 440 aaPredicted RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 CPED1A4D0V7 1026 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 RGSL1A5PLK6 1076 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 FAM149AA5PLN7 773 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 A8MX80 341 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 TK2O00142 265 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 APOL1O14791 398 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PPP1R12AO14974 1030 aaPredicted RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 SPOPO43791 374 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 MFSD11O43934 449 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 TCEA3O75764 348 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 LCA5LO95447 670 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PRB1P04280 392 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PLA2G2AP14555 144 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 MAXP61244 160 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 DPTQ07507 201 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 CYP4F3Q08477 520 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PPIDQ08752 370 aaKnown RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 C1orf61Q13536 156 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 ALG11Q2TAA5 492 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 DEFB133Q30KQ1 61 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 TMTC1Q8IUR5 882 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 TXLNBQ8N3L3 684 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PQLC3Q8N755 202 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 IFI44Q8TCB0 444 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 MAPK15Q8TD08 544 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PIH1D2Q8WWB5 315 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 TSACCQ96A04 125 aaPredicted RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 FUBP1Q96AE4 644 aaKnown RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 NUS1Q96E22 293 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 MRFAP1L1Q96HT8 127 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PANX2Q96RD6 677 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 MCCC1Q96RQ3 725 aaPredicted RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 RBM15Q96T37 977 aaKnown RBP eCLIP9.61□□□□□ -0.874e-6■■■■□ 24.7
CHD7-208ENST00000528280 WDR26Q9H7D7 661 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 DTLQ9NZJ0 730 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 PADI4Q9UM07 663 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 OR1A2Q9Y585 309 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 HEY1Q9Y5J3 304 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 ARID1BQ8NFD5 2236 aaPredicted RBP9.61□□□□□ -0.87
CHD7-208ENST00000528280 HECTD1Q9ULT8 2610 aa9.61□□□□□ -0.87
CHD7-208ENST00000528280 A0A0J9YYE9 177 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TTC24A2A3L6 582 aaPredicted RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 RRP8O43159 456 aaKnown RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 MTSS1O43312 755 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 FZD6O60353 706 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 GCATO75600 419 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 C1QL1O75973 258 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
CHD7-208ENST00000528280 JCHAINP01591 159 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TRBC1P01850 177 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 PRKCGP05129 697 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 MYCLP1P12525 358 aaPredicted RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 PNLIPP16233 465 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ACTN2P35609 894 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 SEMG2Q02383 582 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 GBE1Q04446 702 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 AP1B1Q10567 949 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 SLC10A2Q12908 348 aaPredicted RBP9.6□□□□□ -0.87
CHD7-208ENST00000528280 TRAF2Q12933 501 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 CNGA3Q16281 694 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 CDKN3Q16667 212 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 TPRG1LQ5T0D9 272 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 SLC9A4Q6AI14 798 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 ZNF765Q7L2R6 523 aa9.6□□□□□ -0.87
CHD7-208ENST00000528280 EFL1Q7Z2Z2 1120 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms