RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216		H7C0S8	307 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	COCH	O43405	550 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	EFCAB14	O75071	495 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	VPS4B	O75351	444 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	SOAT2	O75908	522 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	STC2	O76061	302 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	GOT2	P00505	430 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	FGF4	P08620	206 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	HMGA1	P17096	107 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	SP100	P23497	879 aa	Predicted RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	OR1D2	P34982	312 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	MAPK8	P45983	427 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	TTPA	P49638	278 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	KCNQ1	P51787	676 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF140	P52738	457 aa	Predicted RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	HERVK_113	P63132	956 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC25A3	Q00325	362 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	DSG1	Q02413	1049 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBL3	Q12788	808 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	RAB33A	Q14088	237 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	IKBKE	Q14164	716 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	PABPC1L	Q4VXU2	614 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	IRGC	Q6NXR0	463 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	CNKSR3	Q6P9H4	555 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	DEFB128	Q7Z7B8	93 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	ITIH5	Q86UX2	942 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	DEFB107A	Q8IZN7	70 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	PHTF2	Q8N3S3	785 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	CHCHD4	Q8N4Q1	142 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	TMEM199	Q8N511	208 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	NKAP	Q8N5F7	415 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	FBXO27	Q8NI29	283 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	BLOC1S5	Q8TDH9	187 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	DLG3	Q92796	817 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	CDKN2AIPNL	Q96HQ2	116 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	TBATA	Q96M53	351 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	LENG8	Q96PV6	779 aa	Predicted RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	ERVK-6	Q9BXR3	956 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	DERL2	Q9GZP9	239 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	S100A14	Q9HCY8	104 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	NMRK1	Q9NWW6	199 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	TAS2R13	Q9NYV9	303 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	AGO1	Q9UL18	857 aa	Known RBP	10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF510	Q9Y2H8	683 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	ASB3	Q9Y575	518 aa		10.22	□□□□□ -0.77
PGAP2-231	ENST00000528216	CCDC162P	A2VCL2	907 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	SDHD	O14521	159 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	RPSA	P08865	295 aa	Known RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	CSF2RA	P15509	400 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	PFKL	P17858	780 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	LPO	P22079	712 aa	Predicted RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	EPHA3	P29320	983 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	CORO1A	P31146	461 aa	Known RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	SLC6A4	P31645	630 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	GMPR	P36959	345 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ACADVL	P49748	655 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	GATM	P50440	423 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ARSD	P51689	593 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	CLCN4	P51793	760 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ADAR	P55265	1226 aa	Known RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	SULT2A1	Q06520	285 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	PDAP1	Q13442	181 aa	Known RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	BLMH	Q13867	455 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	TXNDC11	Q6PKC3	985 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	MICAL3	Q7RTP6	2002 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ISCA2	Q86U28	154 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	STK40	Q8N2I9	435 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	POU5F2	Q8N7G0	328 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	HJURP	Q8NCD3	748 aa	Predicted RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	STAG3L4	Q8TBR4	150 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	KCNV2	Q8TDN2	545 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	TOP1MT	Q969P6	601 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	DNAJC1	Q96KC8	554 aa	Known RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	B3GALT6	Q96L58	329 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF558	Q96NG5	402 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	CYP2S1	Q96SQ9	504 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	NDN	Q99608	321 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	ZNF184	Q99676	751 aa	Predicted RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	KLF16	Q9BXK1	252 aa	Predicted RBP	10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	NUF2	Q9BZD4	464 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	TMEM45A	Q9NWC5	275 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	GTSE1	Q9NYZ3	720 aa		10.21	□□□□□ -0.77
PGAP2-231	ENST00000528216	LCHN	A4D1U4	455 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	PEX1	O43933	1283 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	ZNF37A	P17032	561 aa	Predicted RBP	10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	LAG3	P18627	525 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	PSMD8	P48556	350 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	CLCN2	P51788	898 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	EPHB3	P54753	998 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	FPGS	Q05932	587 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	RAD51	Q06609	339 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	KLC1	Q07866	573 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	ZNF460	Q14592	562 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	IHH	Q14623	411 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	SPATS1	Q496A3	300 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	ZNF678	Q5SXM1	525 aa		10.21	□□□□□ -0.78
PGAP2-231	ENST00000528216	NXN	Q6DKJ4	435 aa		10.21	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms