RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 ERVK-21P61565 698 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 TIAL1Q01085 375 aaKnown RBP eCLIP20.71■□□□□ 0.91
VPS28-209ENST00000528142 GPM6BQ13491 265 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 FUT11Q495W5 492 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 FAM45BPQ6NSW5 357 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 TBC1D1Q86TI0 1168 aaPredicted RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 SPNS2Q8IVW8 549 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 EFHBQ8N7U6 833 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 OR6K2Q8NGY2 324 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 TTC8Q8TAM2 541 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 FAM45AQ8TCE6 357 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 IRF7Q92985 503 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 VOPP1Q96AW1 172 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 MYO19Q96H55 970 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 SAMD11Q96NU1 681 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 GATA5Q9BWX5 397 aaPredicted RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 MAGEE1Q9HCI5 957 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 INTS10Q9NVR2 710 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 POLR3BQ9NW08 1133 aaPredicted RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 TBC1D14Q9P2M4 693 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 ZMYM5Q9UJ78 669 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 HELZP42694 1942 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 NOTCH4Q99466 2003 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 TMEM114B3SHH9 223 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 SRCP12931 536 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 HOXB8P17481 243 aaPredicted RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 FDXRP22570 491 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 SERPINB3P29508 390 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 SKIV2L2P42285 1042 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 PRKAA2P54646 552 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 AQP5P55064 265 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 RPL26P61254 145 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 TMEM207Q6UWW9 146 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 CLNKQ7Z7G1 428 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 MRPL57Q9BQC6 102 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 SIKE1Q9BRV8 207 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 MRPL46Q9H2W6 279 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 GPAMQ9HCL2 828 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 SPHK2Q9NRA0 654 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 DPP7Q9UHL4 492 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 ZFP69BQ9UJL9 534 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 RPL26L1Q9UNX3 145 aaKnown RBP20.71■□□□□ 0.91
VPS28-209ENST00000528142 HS3ST2Q9Y278 367 aa20.71■□□□□ 0.91
VPS28-209ENST00000528142 TRANK1O15050 2925 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 NEDD8-MDP1E9PL57 170 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 H7C0S8 307 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 ZNF197O14709 1029 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 DLX3O60479 287 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 UNC5CO95185 931 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 LTA4HP09960 611 aaKnown RBP20.7■□□□□ 0.9
VPS28-209ENST00000528142 CEBPBP17676 345 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 SLC26A3P40879 764 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 SUOXP51687 545 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 EPHB1P54762 984 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 CSHL1Q14406 222 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 CTC1Q2NKJ3 1217 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 LIPMQ5VYY2 423 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 ADGRD2Q7Z7M1 963 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 RBM23Q86U06 439 aaKnown RBP20.7■□□□□ 0.9
VPS28-209ENST00000528142 PPP4R1Q8TF05 950 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 ANKRD49Q8WVL7 239 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 SREK1Q8WXA9 508 aaKnown RBP20.7■□□□□ 0.9
VPS28-209ENST00000528142 EID2BQ96D98 161 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 RPL10LQ96L21 214 aaKnown RBP20.7■□□□□ 0.9
VPS28-209ENST00000528142 TCF12Q99081 682 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 BBS2Q9BXC9 721 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 TNKS2Q9H2K2 1166 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 FKBPLQ9UIM3 349 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 ZNF711Q9Y462 761 aa20.7■□□□□ 0.9
VPS28-209ENST00000528142 A0A0U1RQS6 177 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 STX7O15400 261 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 SOCS5O75159 536 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 PIGNO95427 931 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 IGSF6O95976 241 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 SLC4A1P02730 911 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 T-ENOLP0DO92 83 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 PMLP29590 882 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 GKP32189 559 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 STK19P49842 368 aaPredicted RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 KPNA2P52292 529 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 BCL2L1Q07817 233 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 FAM83EQ2M2I3 478 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 AGAP9Q5VTM2 703 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 WDR75Q8IWA0 830 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 ADGRG2Q8IZP9 1017 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 OR2AP1Q8NGE2 309 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 ISG20Q96AZ6 181 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 AARSD1Q9BTE6 412 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 UNKQ9C0B0 810 aaKnown RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 NKX2-4Q9H2Z4 354 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 PNPOQ9NVS9 261 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 IL17CQ9P0M4 197 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 CCDC166P0CW27 439 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 BMP1P13497 986 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 PEX6Q13608 980 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 CBX2Q14781 532 aaPredicted RBP20.69■□□□□ 0.9
VPS28-209ENST00000528142 TECRLQ5HYJ1 363 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 ASRGL1Q7L266 308 aa20.69■□□□□ 0.9
VPS28-209ENST00000528142 PIM3Q86V86 326 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms