RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 hCG_1818297A0A087WSY0 165 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 WDR27A2RRH5 827 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TARSL2A2RTX5 802 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 OR6C75A6NL08 312 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CCDC188H7C350 402 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 H7C4K7 107 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 M0QYT0 321 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CAPN9O14815 690 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FRS3O43559 492 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TBC1D4O60343 1298 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 BAIAP3O94812 1187 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 EFEMP2O95967 443 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FGBP02675 491 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ZGLP1P0C6A0 271 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FAHP16930 419 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 LAG3P18627 525 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FUT4P22083 530 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 HOXC13P31276 330 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 OR1D2P34982 312 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CA8P35219 290 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 THBS2P35442 1172 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PCK1P35558 622 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 COILP38432 576 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 MATKP42679 507 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PTPN9P43378 593 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TPD52P55327 224 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 RAB1AP62820 205 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 YWHAZP63104 245 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 DYNLT1P63172 113 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ROR1Q01973 937 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 GUCY2DQ02846 1103 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ROM1Q03395 351 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FPGSQ05932 587 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 EIF2B5Q13144 721 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 NME3Q13232 169 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DPYSL3Q14195 570 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 KRT81Q14533 505 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 KIR3DS1Q14943 382 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TRADDQ15628 312 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CA9Q16790 459 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SLC25A52Q3SY17 297 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 MGAT5BQ3V5L5 792 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TFDP3Q5H9I0 405 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PPP6R3Q5H9R7 873 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 EFHC1Q5JVL4 640 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FAM209BQ5JX69 171 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FAM182AQ5T1J6 154 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 LRRC38Q5VT99 294 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 GALNT18Q6P9A2 607 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 KLHDC10Q6PID8 442 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CCDC137Q6PK04 289 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 CEP128Q6ZU80 1094 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 BTN2A1Q7KYR7 527 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 POLNQ7Z5Q5 900 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SPRED2Q7Z698 418 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TAC4Q86UU9 113 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 FAM131BQ86XD5 332 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 RFX6Q8HWS3 928 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DCP2Q8IU60 420 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 WFDC3Q8IUB2 231 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ZDHHC17Q8IUH5 632 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CCDC105Q8IYK2 499 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 RCOR2Q8IZ40 523 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 OR8H2Q8N162 312 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SLC39A11Q8N1S5 342 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PYROXD2Q8N2H3 581 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 OXR1Q8N573 874 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 NETO2Q8NC67 525 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 C17orf50Q8WW18 174 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CCT6BQ92526 530 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CENPIQ92674 756 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 HDAC10Q969S8 669 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 RGMAQ96B86 450 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TBC1D20Q96BZ9 403 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 RBM41Q96IZ5 413 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 NPY6RQ99463 290 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SEPT5Q99719 369 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 C11orf84Q9BUA3 381 aaPredicted RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 HERC2P3Q9BVR0 1158 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CALN1Q9BXU9 219 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 TRIM31Q9BZY9 425 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DCLK3Q9C098 648 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DPH5Q9H2P9 285 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SLITRK6Q9H5Y7 841 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DHX35Q9H5Z1 703 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 C10orf88Q9H8K7 445 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 ZMAT3Q9HA38 289 aaKnown RBP4.26□□□□□ -1.73
CD44-226ENST00000527889 CERS4Q9HA82 394 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 NMUR1Q9HB89 426 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PCDH18Q9HCL0 1135 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 EPB41L5Q9HCM4 733 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CSNK1G1Q9HCP0 422 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 CNGB3Q9NQW8 809 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 PIGVQ9NUD9 493 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.26□□□□□ -1.73
CD44-226ENST00000527889 ZNF446Q9NWS9 450 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 DCAF16Q9NXF7 216 aa4.26□□□□□ -1.73
CD44-226ENST00000527889 SPG21Q9NZD8 308 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms