RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CORO2BQ9UQ03 480 aa7.26□□□□□ -1.25
CTNND1-216ENST00000527467 TVP23AA6NH52 213 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CES2O00748 559 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SLC30A4O14863 429 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SPTLC1O15269 473 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 OR10H3O60404 316 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 COX7A2P14406 83 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 HOXA13P31271 388 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 HARS2P49590 506 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ATXN1P54253 815 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MKRN4PQ13434 485 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 EMC2Q15006 297 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ZNHIT3Q15649 155 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SNAPC1Q16533 368 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 COL13A1Q5TAT6 717 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF280DQ6N043 979 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 FAM83HQ6ZRV2 1179 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CLEC17AQ6ZS10 378 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TMC7Q7Z402 723 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MILR1Q7Z6M3 343 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PARP8Q8N3A8 854 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TOR1AIP2Q8NFQ8 470 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DNERQ8NFT8 737 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 OR10H5Q8NGA6 315 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 THAP6Q8TBB0 222 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 FEZF2Q8TBJ5 459 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DQX1Q8TE96 717 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MGME1Q9BQP7 344 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF302Q9NR11 478 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 C19orf12Q9NSK7 152 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 NCDNQ9UBB6 729 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PHF24Q9UPV7 400 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 OR6C70A6NIJ9 312 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 H7C4K7 107 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 UGT2B11O75310 529 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MTA2O94776 668 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 IFNA21P01568 189 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CYP1A1P04798 512 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 AZGP1P25311 298 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CRATP43155 626 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 RAB27AP51159 221 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ACSM2AQ08AH3 577 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SLC45A4Q5BKX6 768 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ACSM2BQ68CK6 577 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TCEAL6Q6IPX3 200 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CRTC1Q6UUV9 634 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 USP43Q70EL4 1123 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DGLUCYQ7Z3D6 616 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TMC3Q7Z5M5 1100 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 LHFPL3Q86UP9 236 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ELOA2Q8IYF1 753 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CSGALNACT1Q8TDX6 532 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 IPCEF1Q8WWN9 437 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 AUTS2Q8WXX7 1259 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 C12orf43Q96C57 262 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DHRS1Q96LJ7 313 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 NMRAL1Q9HBL8 299 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 NECTIN3Q9NQS3 549 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TAS2R7Q9NYW3 318 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 GNEQ9Y223 722 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PCDHB2Q9Y5E7 798 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MDFIC2A0A1B0GVS7 189 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PDE2AO00408 941 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PDCD5O14737 125 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF208O43345 1280 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CST1P01037 141 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 UCHL3P15374 230 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 RPA1P27694 616 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CRABP2P29373 138 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PDX1P52945 283 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PRKCEQ02156 737 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SQLEQ14534 574 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 UAP1L1Q3KQV9 507 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 TRIM40Q6P9F5 258 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 YTHDF3Q7Z739 585 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 RIOX2Q8IUF8 465 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 APOPT1Q96IL0 206 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 IGFLR1Q9H665 355 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 KIAA1257Q9ULG3 409 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PCDHA6Q9UN73 950 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SAMHD1Q9Y3Z3 626 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PCDHA8Q9Y5H6 950 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 FLT1P17948 1338 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 RFX7Q2KHR2 1363 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DLL1O00548 723 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CPNE3O75131 537 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 BCAS1O75363 584 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 FADS2O95864 444 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 LRG1P02750 347 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 MYBL2P10244 700 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SLC2A3P11169 496 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PTPN3P26045 913 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 SLC6A4P31645 630 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 RPL9P32969 192 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 CLK3P49761 638 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 DPYSQ14117 519 aa7.25□□□□□ -1.25
CTNND1-216ENST00000527467 PCDH20Q8N6Y1 951 aaKnown RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 ZNF512Q96ME7 567 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-216ENST00000527467 OR5B12Q96R08 314 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms