RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PKN3Q6P5Z2 889 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 CDHR3Q6ZTQ4 885 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 FAM47EQ6ZV65 393 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 NDUFAF2Q8N183 169 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 GRIN3AQ8TCU5 1115 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 FAM3CQ92520 227 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ZNF778Q96MU6 729 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 CPEB1Q9BZB8 566 aaKnown RBP18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ATP13A3Q9H7F0 1226 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ARNT2Q9HBZ2 717 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ARIH1Q9Y4X5 557 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-203ENST00000527275 PCDHB9Q9Y5E1 797 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.83■□□□□ 0.61
SMPD1-203ENST00000527275 ANKRD65E5RJM6 399 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 TRAFD1O14545 582 aaPredicted RBP18.83■□□□□ 0.61
SMPD1-203ENST00000527275 KIAA0754O94854 1291 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 ITGA2BP08514 1039 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 DHRS4L1P0CG22 281 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 HNRNPLP14866 589 aaKnown RBP eCLIP18.83■□□□□ 0.61
SMPD1-203ENST00000527275 DRD1P21728 446 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 C9orf64Q5T6V5 341 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 KCNMB4Q86W47 210 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 CNPY4Q8N129 248 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 GRAMD1AQ96CP6 724 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 AGAP2Q99490 1192 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 PCMTD2Q9NV79 361 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 MKS1Q9NXB0 559 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 PLLPQ9Y342 182 aa18.83■□□□□ 0.61
SMPD1-203ENST00000527275 WASP42768 502 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 RAD51Q06609 339 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 YTHDF3Q7Z739 585 aaKnown RBP18.83■□□□□ 0.6
SMPD1-203ENST00000527275 PPHLN1Q8NEY8 458 aaKnown RBP18.83■□□□□ 0.6
SMPD1-203ENST00000527275 ERLEC1Q96DZ1 483 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 HEPHQ9BQS7 1158 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 CA14Q9ULX7 337 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 STON1Q9Y6Q2 735 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 WASF2Q9Y6W5 498 aa18.83■□□□□ 0.6
SMPD1-203ENST00000527275 ATXN2Q99700 1313 aaKnown RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 EDDM13A0A1B0GTR0 161 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 CCDC78A2IDD5 438 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 FZD6O60353 706 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SIN3BO75182 1162 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 NDST3O95803 873 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 EPHX1P07099 455 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SERPINA4P29622 427 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 PDE1BQ01064 536 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ENPP2Q13822 863 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 MLF2Q15773 248 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SPATA21Q7Z572 469 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 STRA8Q7Z7C7 330 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ACMSDQ8TDX5 336 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 RMDN1Q96DB5 314 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 MSANTD3Q96H12 275 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 TUBGCP5Q96RT8 1024 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 PHTF1Q9UMS5 762 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 HTRA2O43464 458 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SOCS5O75159 536 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 LEFTY1O75610 366 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ALDOAP04075 364 aaKnown RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 UGT2B4P06133 528 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 CTSLP07711 333 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 CHRM1P11229 460 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 HLA-DPA1P20036 260 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 CRHR1P34998 444 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SPRP35270 261 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ARMC12Q5T9G4 340 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 RNF187Q5TA31 235 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 CGB2Q6NT52 195 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 LPCAT1Q8NF37 534 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 PTCD2Q8WV60 388 aaKnown RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ASB2Q96Q27 587 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ADGRE3Q9BY15 652 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SUV39H2Q9H5I1 410 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 SLCO1B3Q9NPD5 702 aa18.82■□□□□ 0.6
SMPD1-203ENST00000527275 IARS2Q9NSE4 1012 aaKnown RBP18.82■□□□□ 0.6
SMPD1-203ENST00000527275 ANKRD66B4E2M5 251 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PGLSO95336 258 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PRKCGP05129 697 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 SLC8A1P32418 973 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 MSLNQ13421 630 aaPredicted RBP18.81■□□□□ 0.6
SMPD1-203ENST00000527275 CCINQ13939 588 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 ARSIQ5FYB1 569 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PDPK2PQ6A1A2 396 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 STK40Q8N2I9 435 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 OTUD6BQ8N6M0 293 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 SMIM14Q96QK8 99 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 RBBP8Q99708 897 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 MANSC1Q9H8J5 431 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 IL36AQ9UHA7 158 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 NDRG2Q9UN36 371 aaKnown RBP18.81■□□□□ 0.6
SMPD1-203ENST00000527275 TCAF1Q9Y4C2 921 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 TPP1O14773 563 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 FGF1P05230 155 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PIRTP0C851 137 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 ELAVL3Q14576 367 aaKnown RBP18.81■□□□□ 0.6
SMPD1-203ENST00000527275 GRM3Q14832 879 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 ZSWIM9Q86XI8 627 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 PAF1Q8N7H5 531 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 IL17RCQ8NAC3 791 aa18.81■□□□□ 0.6
SMPD1-203ENST00000527275 ZNF641Q96N77 438 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms