RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 USP45Q70EL2 814 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 ZSWIM9Q86XI8 627 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 SUGP1Q8IWZ8 645 aaKnown RBP20.52■□□□□ 0.88
SMCO4-203ENST00000526869 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 OTUD6BQ8N6M0 293 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 CHST14Q8NCH0 376 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 SCRN2Q96FV2 425 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 SMIM14Q96QK8 99 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 INTS10Q9NVR2 710 aaKnown RBP20.52■□□□□ 0.88
SMCO4-203ENST00000526869 DKK3Q9UBP4 350 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 DCDC2Q9UHG0 476 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 PLLPQ9Y342 182 aa20.52■□□□□ 0.88
SMCO4-203ENST00000526869 EDDM13A0A1B0GTR0 161 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 GMNCA6NCL1 334 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 BNIP3LO60238 219 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 S1PR4O95977 384 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 UGT2B4P06133 528 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 ALPIP09923 528 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 CTPS1P17812 591 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 IGFBP4P22692 258 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 NFKBIAP25963 317 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 HNF1BP35680 557 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 ETV4P43268 484 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 PTPN5P54829 565 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 TMPRSS15P98073 1019 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 POU4F1Q01851 419 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 MESP2Q0VG99 397 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 PDE1CQ14123 709 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 PTPRCAPQ14761 206 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 HNRNPA1L2Q32P51 320 aaKnown RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 LVRNQ6Q4G3 990 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 KYAT3Q6YP21 454 aaKnown RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 RGS9BPQ6ZS82 235 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 TPRG1Q6ZUI0 275 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 NUDT18Q6ZVK8 323 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 LYSMD3Q7Z3D4 306 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 CCDC91Q7Z6B0 441 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 MAGEB18Q96M61 343 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 GAS2L1Q99501 681 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 VPS11Q9H270 941 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 SUDS3Q9H7L9 328 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 ZFYVE1Q9HBF4 777 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 GTSE1Q9NYZ3 720 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 MARCH4Q9P2E8 410 aaPredicted RBP20.51■□□□□ 0.87
SMCO4-203ENST00000526869 IL36AQ9UHA7 158 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 GRID1Q9ULK0 1009 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 VPS9D1Q9Y2B5 631 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 ANKRD6Q9Y2G4 727 aa20.51■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF106Q9H2Y7 1883 aaKnown RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 FAM95CA0A1B0GW59 222 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 CCL22O00626 93 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 CRABP2P29373 138 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 FOXN2P32314 431 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 GRIA2P42262 883 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 STC1P52823 247 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 PPARDQ03181 441 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 ZKSCAN8Q15776 578 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 FNDC3BQ53EP0 1204 aaKnown RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 FASTKD1Q53R41 847 aaKnown RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 RNF187Q5TA31 235 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 CBARPQ8N350 705 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 ST13P5Q8NFI4 369 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 MYLIPQ8WY64 445 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 KLHL32Q96NJ5 620 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF317Q96PQ6 595 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 FBXO6Q9NRD1 293 aaPredicted RBP20.5■□□□□ 0.87
SMCO4-203ENST00000526869 SLC17A7Q9P2U7 560 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 NUMBLQ9Y6R0 609 aa20.5■□□□□ 0.87
SMCO4-203ENST00000526869 C1orf232A0A0U1RR37 186 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 OR51F1A6NGY5 319 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 PFDN6O15212 129 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 HAUS5O94927 633 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 KAT7O95251 611 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 COL6A2P12110 1019 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 USP10Q14694 798 aaKnown RBP20.49■□□□□ 0.87
SMCO4-203ENST00000526869 DBN1Q16643 649 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 PDK4Q16654 411 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 TAF1BQ53T94 588 aaPredicted RBP20.49■□□□□ 0.87
SMCO4-203ENST00000526869 AARS2Q5JTZ9 985 aaKnown RBP20.49■□□□□ 0.87
SMCO4-203ENST00000526869 CNSTQ6PJW8 725 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 CLEC14AQ86T13 490 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 TAX1BP1Q86VP1 789 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 GDAP1Q8TB36 358 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 TSPAN17Q96FV3 270 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 ATXN7L3BQ96GX2 97 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 SLC13A1Q9BZW2 595 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 TMEM245Q9H330 911 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 MLXIPLQ9NP71 852 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 FKBPLQ9UIM3 349 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 SLC39A10Q9ULF5 831 aa20.49■□□□□ 0.87
SMCO4-203ENST00000526869 COLQQ9Y215 455 aaPredicted RBP20.49■□□□□ 0.87
SMCO4-203ENST00000526869 SCN8AQ9UQD0 1980 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 REV3LO60673 3130 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 A0A096LPK6 155 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 TBC1D3BA6NDS4 549 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 NPC1O15118 1278 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 PRNPP04156 253 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 APODP05090 189 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms