RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MANEAQ5SRI9 462 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 GUSBP11Q6P575 273 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 LINGO4Q6UY18 593 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 BBS12Q6ZW61 710 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 SLC35F6Q8N357 371 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 DCAF4L2Q8NA75 395 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 TRIM58Q8NG06 486 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 PTPRN2Q92932 1015 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 MIB2Q96AX9 1013 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 ARRDC3Q96B67 414 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 OLFM3Q96PB7 478 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 HEMGNQ9BXL5 484 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 DTLQ9NZJ0 730 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 HS3ST2Q9Y278 367 aa11.02□□□□□ -0.65
NEDD8-204ENST00000526430 CXorf51AA0A1B0GTR3 108 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 TYW5A2RUC4 315 aaKnown RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 TTC34A8MYJ7 566 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 DAPK3O43293 454 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ATP9BO43861 1147 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 CST8O60676 142 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 PRAMEF11O60813 436 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 RAMP2O60895 175 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 MAP3K6O95382 1288 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ATP1A1P05023 1023 aaKnown RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 SRPRAP08240 638 aaKnown RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 SRCP12931 536 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 VAV1P15498 845 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 OXCT1P55809 520 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 COPS2P61201 443 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 HNRNPKP61978 463 aaKnown RBP eCLIP11.01□□□□□ -0.655e-7■□□□□ 9.7
NEDD8-204ENST00000526430 ECT2LQ008S8 904 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 GALNT2Q10471 571 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ELAVL3Q14576 367 aaKnown RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 IHHQ14623 411 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 CYTH1Q15438 398 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 CDKN3Q16667 212 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 TFDP3Q5H9I0 405 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ZNF569Q5MCW4 686 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 BORAQ6PGQ7 559 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 TMCO3Q6UWJ1 677 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 EFL1Q7Z2Z2 1120 aaKnown RBP11.01□□□□□ -0.65
NEDD8-204ENST00000526430 DSG4Q86SJ6 1040 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 MAP7D3Q8IWC1 876 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 SH2D3CQ8N5H7 860 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 LZTR1Q8N653 840 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 UBE2Q2Q8WVN8 375 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 TSGA13Q96PP4 275 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 SPON2Q9BUD6 331 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 MUC3BQ9H195 1237 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ATP13A1Q9HD20 1204 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 WDR70Q9NW82 654 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 VPS28Q9UK41 221 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 CSNK1G3Q9Y6M4 447 aa11.01□□□□□ -0.65
NEDD8-204ENST00000526430 ZFHX3Q15911 3703 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 CPED1A4D0V7 1026 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 MAT2AP31153 395 aaKnown RBP11□□□□□ -0.65
NEDD8-204ENST00000526430 UGT1A5P35504 534 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 POLE2P56282 527 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 SPIDRQ14159 915 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 RPS6KA1Q15418 735 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 PARP15Q460N3 678 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11□□□□□ -0.65
NEDD8-204ENST00000526430 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 B4GALNT4Q76KP1 1039 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 RAB11FIP2Q7L804 512 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 ATCAYQ86WG3 371 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 DTX1Q86Y01 620 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 PGBD5Q8N414 524 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 FAM174AQ8TBP5 190 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 NAT6Q93015 286 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 OSBPL8Q9BZF1 889 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 PREBQ9HCU5 417 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 PLAAQ9Y263 795 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 ZKSCAN5Q9Y2L8 839 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 JRKLQ9Y4A0 524 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 CELSR1Q9NYQ6 3014 aa11□□□□□ -0.65
NEDD8-204ENST00000526430 ZNF106Q9H2Y7 1883 aaKnown RBP11□□□□□ -0.65
NEDD8-204ENST00000526430 SHANK1Q9Y566 2161 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 TMX2-CTNND1H3BSU7 103 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 NTN3O00634 580 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 APOL1O14791 398 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 MUSKO15146 869 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 NEBLO76041 1014 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 WT1P19544 449 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 TNFRSF8P28908 595 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 CXCR5P32302 372 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 GARSP41250 739 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 RGRP47804 291 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SERPINH1P50454 418 aaKnown RBP10.99□□□□□ -0.65
NEDD8-204ENST00000526430 DNA2P51530 1060 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 CYP4F2P78329 520 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SULT2A1Q06520 285 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SLC20A2Q08357 652 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 SLC10A7Q0GE19 358 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 DLG2Q15700 870 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 KRTAP21-3Q3LHN1 58 aa10.99□□□□□ -0.65
NEDD8-204ENST00000526430 PERM1Q5SV97 790 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms