RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 SLC35F6Q8N357 371 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.28■□□□□ 0.36
LMX1B-203ENST00000526117 MRGPRX2Q96LB1 330 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 GORASP1Q9BQQ3 440 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 C10orf88Q9H8K7 445 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 MBNL1Q9NR56 388 aaKnown RBP17.28■□□□□ 0.36
LMX1B-203ENST00000526117 TRMT1Q9NXH9 659 aaKnown RBP17.28■□□□□ 0.36
LMX1B-203ENST00000526117 CA5BQ9Y2D0 317 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 FNDC3AQ9Y2H6 1198 aaKnown RBP17.28■□□□□ 0.36
LMX1B-203ENST00000526117 COQ6Q9Y2Z9 468 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 USP27XA6NNY8 438 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 FGGP02679 453 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 CD59P13987 128 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 CTPS1P17812 591 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 CSRP1P21291 193 aaKnown RBP17.27■□□□□ 0.36
LMX1B-203ENST00000526117 ACOX1Q15067 660 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 PARP6Q2NL67 630 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 CCDC70Q6NSX1 233 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 PTAR1Q7Z6K3 402 aaPredicted RBP17.27■□□□□ 0.36
LMX1B-203ENST00000526117 TSPAN33Q86UF1 283 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 NUS1Q96E22 293 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 TBATAQ96M53 351 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 MYOCQ99972 504 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 TMEM121Q9BTD3 319 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 TRABDQ9H4I3 376 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 TM7SF3Q9NS93 570 aa17.27■□□□□ 0.36
LMX1B-203ENST00000526117 NFKBIL1Q9UBC1 381 aaPredicted RBP17.27■□□□□ 0.36
LMX1B-203ENST00000526117 DRG1Q9Y295 367 aaKnown RBP17.27■□□□□ 0.36
LMX1B-203ENST00000526117 ENC1O14682 589 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 CEP104O60308 925 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 PMPCBO75439 489 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 FGF1P05230 155 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 PYGLP06737 847 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 ATXN1LP0C7T5 689 aaKnown RBP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 TSHRP16473 764 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 ADRA1AP35348 466 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 TNNT3P45378 269 aaPredicted RBP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 ID4P47928 161 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 SEMG2Q02383 582 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 FZD2Q14332 565 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 PRPSAP1Q14558 356 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 SUZ12Q15022 739 aaKnown RBP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 SHBQ15464 509 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 SLC1A5Q15758 541 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 RANBP10Q6VN20 620 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 MACC1Q6ZN28 852 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 HSD11B1LQ7Z5J1 315 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 PARGQ86W56 976 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 OR2I1PQ8NGU4 316 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 CCDC110Q8TBZ0 833 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 ATG4AQ8WYN0 398 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 NAP1L3Q99457 506 aaPredicted RBP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 CDH19Q9H159 772 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 IL21RQ9HBE5 538 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 FEZ2Q9UHY8 353 aaPredicted RBP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 SNX12Q9UMY4 172 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
LMX1B-203ENST00000526117 TMEM131Q92545 1883 aa17.26■□□□□ 0.35
LMX1B-203ENST00000526117 C1orf232A0A0U1RR37 186 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 FLRT2O43155 660 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
LMX1B-203ENST00000526117 C1SP09871 688 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 PSMB4P28070 264 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 EPHA8P29322 1005 aaPredicted RBP17.25■□□□□ 0.35
LMX1B-203ENST00000526117 CXCR5P32302 372 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GDF10P55107 478 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 KIAA1024LP59773 190 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 DCDC1P59894 354 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GALNT3Q14435 633 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 INPP5AQ14642 412 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 PCSK7Q16549 785 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 KCTD11Q693B1 232 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 PNCKQ6P2M8 343 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 ARHGEF18Q6ZSZ5 1173 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 KANSL1Q7Z3B3 1105 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 CCHCR1Q8TD31 782 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 ACTRT1Q8TDG2 376 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 SAP25Q8TEE9 199 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 OSBPL9Q96SU4 736 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 C19orf43Q9BQ61 176 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 FSD1LQ9BXM9 530 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 ARNT2Q9HBZ2 717 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 RAD18Q9NS91 495 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 GOLGA6AQ9NYA3 693 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 UBP1Q9NZI7 540 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 HACD3Q9P035 362 aa17.25■□□□□ 0.35
LMX1B-203ENST00000526117 COL5A1P20908 1838 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-203ENST00000526117 ERI2A8K979 691 aaKnown RBP17.24■□□□□ 0.35
LMX1B-203ENST00000526117 A8MX80 341 aa17.24■□□□□ 0.35
LMX1B-203ENST00000526117 CLDN7O95471 211 aa17.24■□□□□ 0.35
LMX1B-203ENST00000526117 CSF2P04141 144 aa17.24■□□□□ 0.35
LMX1B-203ENST00000526117 NME1P15531 152 aaKnown RBP17.24■□□□□ 0.35
LMX1B-203ENST00000526117 ETV3P41162 512 aa17.24■□□□□ 0.35
LMX1B-203ENST00000526117 SPINT3P49223 89 aa17.24■□□□□ 0.35
LMX1B-203ENST00000526117 PDE1CQ14123 709 aaPredicted RBP17.24■□□□□ 0.35
LMX1B-203ENST00000526117 NFATC4Q14934 902 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms