RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 C11orf65Q8NCR3 313 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
LRRK1-202ENST00000525284 TRHDEQ9UKU6 1024 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 CHD1O14646 1710 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 MTHFRP42898 656 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 MYL6P60660 151 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 NFIAQ12857 509 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 ALX1Q15699 326 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 LACTB2Q53H82 288 aaPredicted RBP13.69□□□□□ -0.22
LRRK1-202ENST00000525284 IDNKQ5T6J7 187 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 MCMBPQ9BTE3 642 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 BPIFA1Q9NP55 256 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 MTMR4Q9NYA4 1195 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 H3BNH8 94 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 ASMTP46597 345 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 PGDP52209 483 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 SSTP61278 116 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 PFKPQ01813 784 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 STXBP5Q5T5C0 1151 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 OGFOD2Q6N063 350 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 MPZL3Q6UWV2 235 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 CXorf40BQ96DE9 158 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 DDX43Q9NXZ2 648 aaKnown RBP13.69□□□□□ -0.22
LRRK1-202ENST00000525284 PADI2Q9Y2J8 665 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 PLK4O00444 970 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 UBE2R2Q712K3 238 aaPredicted RBP13.69□□□□□ -0.22
LRRK1-202ENST00000525284 GRIN3AQ8TCU5 1115 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 ELMO3Q96BJ8 720 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 AASDHPPTQ9NRN7 309 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
LRRK1-202ENST00000525284 FTH1P02794 183 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 SLC7A2P52569 658 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 SLC12A3P55017 1021 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 S100A10P60903 97 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 C6orf52Q5T4I8 152 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 USP45Q70EL2 814 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 AHSA2Q719I0 299 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ALYREFQ86V81 257 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 COQ8BQ96D53 544 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 FADS3Q9Y5Q0 445 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CPDO75976 1380 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 TSPOAP1O95153 1857 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ANXA2P2A6NMY6 339 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ATP6V1G1O75348 118 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ANXA2P07355 339 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 PRKG2Q13237 762 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 TMEM110Q86TL2 294 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 STK40Q8N2I9 435 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 PNPT1Q8TCS8 783 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CELF1Q92879 486 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 NPAS2Q99743 824 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 THG1LQ9NWX6 298 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF69Q9UC07 566 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 DNPEPQ9ULA0 475 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 GAKO14976 1311 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ATP6AP2A0A1C7CYW4 349 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 E2F3O00716 465 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 BCKDKO14874 412 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ATP6AP2O75787 350 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 MLYCDO95822 493 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 YBX3P16989 372 aaKnown RBP eCLIP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 GDI2P50395 445 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 TLR1Q15399 786 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 L2HGDHQ9H9P8 463 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 NUAK1O60285 661 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CPNE3O75131 537 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 PRKD3O94806 890 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 IFNA7P01567 189 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 THP07101 528 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CHRM5P08912 532 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 OR3A3P47888 321 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 OR3A2P47893 321 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 PTPN11Q06124 597 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ITIH5Q86UX2 942 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 GHDCQ8N2G8 530 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 TAMM41Q96BW9 452 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 PGLYRP2Q96PD5 576 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 GPATCH1Q9BRR8 931 aaKnown RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 C1QTNF7Q9BXJ2 289 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 POLR3HQ9Y535 204 aaPredicted RBP13.68□□□□□ -0.22
LRRK1-202ENST00000525284 GSTT2BP0CG30 244 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ALDH4A1P30038 563 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 MMP13P45452 471 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CLCN3P51790 818 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF280DQ6N043 979 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 HM13Q8TCT9 377 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 ASB8Q9H765 288 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
LRRK1-202ENST00000525284 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
LRRK1-202ENST00000525284 FABP12A6NFH5 140 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms