RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SPTBN2O15020 2390 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 DMXL1Q9Y485 3027 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 IGHV4-28A0A0C4DH34 117 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CLRN2A0PK11 232 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TMEM8BA6NDV4 472 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SLC15A5A6NIM6 579 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 NPIPB13A6NJU9 1138 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 NPIPB5A8MRT5 1133 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 C19orf81C9J6K1 198 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 NPIPB4C9JG80 1138 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 KBTBD13C9JR72 458 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 HNRNPDLO14979 420 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 TIMP1P01033 207 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CGAP01215 116 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 PRSS2P07478 247 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 MYZAPP0CAP1 466 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CYBAP13498 195 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 HOXB9P17482 250 aaPredicted RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 AVPR1AP37288 418 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TNNT2P45379 298 aaPredicted RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 CDK7P50613 346 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 PNLIPRP1P54315 467 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 BRWD1-AS2P59051 145 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 GRB14Q14449 540 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 KIF19Q2TAC6 998 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SYTL3Q4VX76 610 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 FSCBQ5H9T9 825 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 LCE3CQ5T5A8 94 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 IZUMO3Q5VZ72 239 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TATDN1Q6P1N9 297 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 MTFR2Q6P444 385 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 ZNF449Q6P9G9 518 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CCDC25Q86WR0 208 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CAMK1DQ8IU85 385 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 FOXP4Q8IVH2 680 aaPredicted RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 CERS5Q8N5B7 392 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 ENDOVQ8N8Q3 282 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 GPRC5AQ8NFJ5 357 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 CEP76Q8TAP6 659 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SLC2A12Q8TD20 617 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 C2CD4CQ8TF44 421 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TMED6Q8WW62 240 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TEKT1Q969V4 418 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 KIAA1191Q96A73 305 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 RTP4Q96DX8 246 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 WBP1Q96G27 269 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 REXO5Q96IC2 774 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 CFAP53Q96M91 514 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 RIPOR3Q96MK2 946 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 NODALQ96S42 347 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 MAF1Q9H063 256 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SIL1Q9H173 461 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 ABHD16BQ9H3Z7 469 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 EPHX3Q9H6B9 360 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SLC28A3Q9HAS3 691 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 OCIAD1Q9NX40 245 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 HERC5Q9UII4 1024 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 OSGIN2Q9Y236 505 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 RABGAP1Q9Y3P9 1069 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 MTCH2Q9Y6C9 303 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 LOC285556D6RIA3 1793 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 TECTAO75443 2155 aa1.79□□□□□ -2.12
CD44-212ENST00000524922 SPTAN1Q13813 2472 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 ANKRD17O75179 2603 aaKnown RBP1.79□□□□□ -2.12
CD44-212ENST00000524922 LAMA5O15230 3695 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ZZEF1O43149 2961 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 MYO9AB2RTY4 2548 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PRRC2BQ5JSZ5 2229 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 RLFQ13129 1914 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 MROH5Q6ZUA9 1318 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 A0A1B0GVY2 172 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PLSCR5A0PG75 271 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PRR23AA6NEV1 266 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 AGAP5A6NIR3 686 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 AQP12BA6NM10 295 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 TULP2O00295 520 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 CHL1O00533 1208 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 HSPB6O14558 160 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PIP5K1BO14986 540 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 DNPH1O43598 174 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 LRP3O75074 770 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 DDX58O95786 925 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 DDAH2O95865 285 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ASNSP08243 561 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 GPTP24298 496 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PRKCHP24723 683 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 KLRC2P26717 231 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PRKAR2BP31323 418 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 MXI1P50539 228 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 NUDT6P53370 316 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 TMPRSS3P57727 454 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ARHGAP8P85298 464 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 CALD1Q05682 793 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 SIGLEC14Q08ET2 396 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ARL16Q0P5N6 197 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 SF3A3Q12874 501 aaKnown RBP eCLIP1.78□□□□□ -2.12
CD44-212ENST00000524922 IFIT5Q13325 482 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 DCTN1Q14203 1278 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 CTTNQ14247 550 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 PLCB4Q15147 1175 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms