RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 AFAP1L2Q8N4X5 818 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 OR13C4Q8NGS5 318 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 UBXN10Q96LJ8 280 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 KLF16Q9BXK1 252 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 MUC3BQ9H195 1237 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 VCX3BQ9H321 246 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 WDR55Q9H6Y2 383 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 GTSE1Q9NYZ3 720 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 DLGAP2Q9P1A6 1054 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 GBF1Q92538 1859 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 OBSL1O75147 1896 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 C2orf78A6NCI8 922 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 TRPC5OSA6NMA1 111 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 A8MT66 165 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 CBX4O00257 560 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PRRG1O14668 218 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC22A2O15244 555 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 IPO13O94829 963 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 FDXRP22570 491 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 EPHA3P29320 983 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 RGRP47804 291 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 SCNN1BP51168 640 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 CCNIQ14094 377 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PDCD2Q16342 344 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 LSM12Q3MHD2 195 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 RNF219Q5W0B1 726 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 IZUMO2Q6UXV1 221 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 FRMD7Q6ZUT3 714 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 DEFB107AQ8IZN7 70 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 FBXW8Q8N3Y1 598 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 RMDN1Q96DB5 314 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 FAR2Q96K12 515 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 EML4Q9HC35 981 aaKnown RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 CYP4F12Q9HCS2 524 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 CRYL1Q9Y2S2 319 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 ARIH1Q9Y4X5 557 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 THRAP10827 490 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PIK3R1P27986 724 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PMLP29590 882 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZNF140P52738 457 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 EPHB1P54762 984 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 TWF1Q12792 350 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PTPRCAPQ14761 206 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 NXNQ6DKJ4 435 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 OR52E8Q6IFG1 317 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 AFTPHQ6ULP2 937 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 GLT6D1Q7Z4J2 308 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 DHDDSQ86SQ9 333 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PIM3Q86V86 326 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC39A11Q8N1S5 342 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 ANKRD49Q8WVL7 239 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 EXOC2Q96KP1 924 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 TOX2Q96NM4 488 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 RNF38Q9H0F5 515 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZDHHC7Q9NXF8 308 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 TBC1D30Q9Y2I9 924 aa13.78□□□□□ -0.2
LDLRAD3-202ENST00000524419 LOC100653049A0A140TA62 436 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 KRT34O76011 436 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 URODP06132 367 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 CR2P20023 1033 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 ADSLP30566 484 aaPredicted RBP13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 STC1P52823 247 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 EPHB3P54753 998 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 MTTPP55157 894 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 XIAPP98170 497 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 CDC16Q13042 620 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 CYTH1Q15438 398 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 GPR158Q5T848 1215 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 ZNF783Q6ZMS7 281 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 CPSF7Q8N684 471 aaKnown RBP13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 TDRD1Q9BXT4 1180 aaKnown RBP13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 ALG9Q9H6U8 611 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 INTS10Q9NVR2 710 aaKnown RBP13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 POMPQ9Y244 141 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
LDLRAD3-202ENST00000524419 SMIM24O75264 130 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 PDE5AO76074 875 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 LATS1O95835 1130 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 KCNA5P22460 613 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 RAB33AQ14088 237 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 SEMA3AQ14563 771 aa13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
LDLRAD3-202ENST00000524419 TYSND1Q2T9J0 566 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms