RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 CCP110O43303 1012 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PAX4O43316 350 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 NOBOXO60393 691 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 NEMFO60524 1076 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 E2F6O75461 281 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CYP7B1O75881 506 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ENDOD1O94919 500 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 FSBPO95073 299 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 MPIG6BO95866 241 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PRLP01236 227 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 KRT7P08729 469 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 C1SP09871 688 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TMEM253P0C7T8 217 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TKTP29401 623 aaKnown RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ALDH3A2P51648 485 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ITGA1P56199 1179 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 C21orf58P58505 322 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CYP4F2P78329 520 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 IFI35P80217 286 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ALDH6A1Q02252 535 aaKnown RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 KLHL30Q0D2K2 578 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ADAM9Q13443 819 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PMS2P11Q13670 270 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 KCNB1Q14721 858 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SHBQ15464 509 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SURF1Q15526 300 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF674Q2M3X9 581 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ODF2Q5BJF6 829 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LAYNQ6UX15 382 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SLC36A4Q6YBV0 504 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF783Q6ZMS7 281 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TRMT1LQ7Z2T5 733 aaKnown RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 KANSL1Q7Z3B3 1105 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PRIMA1Q86XR5 153 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CILP2Q8IUL8 1156 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CPOQ8IVL8 374 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TMEM151BQ8IW70 566 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SYTL1Q8IYJ3 562 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ATG16L2Q8NAA4 619 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 KYQ8NBH2 561 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 DRAXINQ8NBI3 349 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SPC24Q8NBT2 197 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CALML6Q8TD86 181 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ADAMTS15Q8TE58 950 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ACAP3Q96P50 834 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PPP1R9BQ96SB3 815 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 GORASP1Q9BQQ3 440 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 AGXT2Q9BYV1 514 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 EDEM3Q9BZQ6 932 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TM6SF1Q9BZW5 370 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 GPR88Q9GZN0 384 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 OR10A4Q9H209 315 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LY9Q9HBG7 655 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ASAH2Q9NR71 780 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ECHDC1Q9NTX5 307 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LMBRD1Q9NUN5 540 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 GALNT8Q9NY28 637 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LRFN1Q9P244 771 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 RASAL2Q9UJF2 1139 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 HPCAL4Q9UM19 191 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 L1RE1Q9UN81 338 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LIMCH1Q9UPQ0 1083 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CLCA2Q9UQC9 943 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ANAPC1Q9H1A4 1944 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ZANQ9Y493 2812 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 RP1P56715 2156 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 SCN8AQ9UQD0 1980 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 NFASCO94856 1347 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 CASTOR2A6NHX0 329 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 A8MVJ9 347 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 FFAR2O15552 330 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 CYTH3O43739 400 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 ZBTB14O43829 449 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 ALDH1A2O94788 518 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 UBXN7O94888 489 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 KLF8O95600 359 aaPredicted RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 PLATP00750 562 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 TPM3P06753 285 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 CCDC172P0C7W6 258 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 PORP16435 677 aaPredicted RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 ATP5JP18859 108 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 PDCP20941 246 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 MSNP26038 577 aaKnown RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 MCM5P33992 734 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 POLD2P49005 469 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 AFF3P51826 1226 aaKnown RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 MLLT10P55197 1068 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 RNASE9P60153 205 aaKnown RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 ROM1Q03395 351 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 TIGD7Q6NT04 549 aaPredicted RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 WDR73Q6P4I2 378 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 IL27RAQ6UWB1 636 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 CXXC5Q7LFL8 322 aaKnown RBP5.27□□□□□ -1.57
PABPC1-223ENST00000523636 XYLT1Q86Y38 959 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 GATAD2AQ86YP4 633 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 CMIPQ8IY22 773 aa5.27□□□□□ -1.57
PABPC1-223ENST00000523636 POU5F2Q8N7G0 328 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms