RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 AKTIPQ9H8T0 292 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 CNOT6Q9ULM6 557 aaKnown RBP17.9■□□□□ 0.46
IKBKB-228ENST00000523517 SCML2Q9UQR0 700 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 DMTF1Q9Y222 760 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 ARHGEF37A1IGU5 675 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 CCDC160A6NGH7 325 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 CD1DP15813 335 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 FDXRP22570 491 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 FGFR3P22607 806 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 SH3BP2P78314 561 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 ADRM1Q16186 407 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 SLC39A12Q504Y0 691 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 SDHAF4Q5VUM1 108 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 HMBOX1Q6NT76 420 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 MSANTD2Q6P1R3 559 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 AMIGO2Q86SJ2 522 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 ZNF354CQ86Y25 554 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 PGBD5Q8N414 524 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 EFHD1Q9BUP0 239 aa17.9■□□□□ 0.46
IKBKB-228ENST00000523517 POLR3BQ9NW08 1133 aaPredicted RBP17.9■□□□□ 0.46
IKBKB-228ENST00000523517 LOC285095A0A1B0GVY8 99 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 TNPO2O14787 897 aaKnown RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 DUSP11O75319 330 aaKnown RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 IGHA2P01877 340 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 HSPA8P11142 646 aaKnown RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 USP46P62068 366 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 TNK2Q07912 1038 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 BIRC2Q13490 618 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 DSC3Q14574 896 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 ZNF549Q6P9A3 640 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 RETREG3Q86VR2 466 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 PTGR2Q8N8N7 351 aaPredicted RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 PCYOX1LQ8NBM8 494 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 EXT2Q93063 718 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 HIC2Q96JB3 615 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 TBATAQ96M53 351 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 SLC29A1Q99808 456 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 NOL11Q9H8H0 719 aaKnown RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 PCDHB8Q9UN66 801 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 DNAJC15Q9Y5T4 150 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 MYLKQ15746 1914 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 BPTFQ12830 3046 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 BBIP1A8MTZ0 92 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 STAMBPO95630 424 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 THPOP40225 353 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 RPS6KA3P51812 740 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 PITRM1Q5JRX3 1037 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 IRAK1BP1Q5VVH5 260 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 BORAQ6PGQ7 559 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 CARM1Q86X55 608 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 ADAM2Q99965 735 aa17.89■□□□□ 0.45
IKBKB-228ENST00000523517 GMPR2Q9P2T1 348 aaKnown RBP17.89■□□□□ 0.45
IKBKB-228ENST00000523517 NYNRINQ9P2P1 1898 aaKnown RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 A0A1B0GTW7 788 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 CDK14O94921 469 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ASLP04424 464 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 FGF4P08620 206 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 TIAL1Q01085 375 aaKnown RBP eCLIP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 CYTH1Q15438 398 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 KIF19Q2TAC6 998 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 MAP7D1Q3KQU3 841 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 RYBPQ8N488 228 aaPredicted RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 OR2T34Q8NGX1 318 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 OR2T3Q8NH03 318 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ASB2Q96Q27 587 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 CIB1Q99828 191 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 GPATCH1Q9BRR8 931 aaKnown RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 A0A0J9YYE9 177 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ARHGAP10A1A4S6 786 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ZNF839A8K0R7 811 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 PPP6CO00743 305 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 GLP2RO95838 553 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 GOT2P00505 430 aaKnown RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ETFBP38117 255 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 GPR15P49685 360 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ACVR1Q04771 509 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 DDR2Q16832 855 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 NUP93Q8N1F7 819 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 ANKFN1Q8N957 763 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 TRPV1Q8NER1 839 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 TSPAN14Q8NG11 270 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 PPWD1Q96BP3 646 aaKnown RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 UPF3AQ9H1J1 476 aaKnown RBP17.88■□□□□ 0.45
IKBKB-228ENST00000523517 MAP10Q9P2G4 905 aa17.88■□□□□ 0.45
IKBKB-228ENST00000523517 IGLV3-10A0A075B6K4 115 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 NR5A2O00482 541 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 CD3EAPO15446 510 aaKnown RBP17.87■□□□□ 0.45
IKBKB-228ENST00000523517 SIX3O95343 332 aaPredicted RBP17.87■□□□□ 0.45
IKBKB-228ENST00000523517 NME5P56597 212 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 ILF2Q12905 390 aaKnown RBP17.87■□□□□ 0.45
IKBKB-228ENST00000523517 OR4D1Q15615 310 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 RAB44Q7Z6P3 723 aaPredicted RBP17.87■□□□□ 0.45
IKBKB-228ENST00000523517 MYO1HQ8N1T3 1032 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 C2orf69Q8N8R5 385 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 GPR150Q8NGU9 434 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 IGSF8Q969P0 613 aa17.87■□□□□ 0.45
IKBKB-228ENST00000523517 DNAJC1Q96KC8 554 aaKnown RBP17.87■□□□□ 0.45
IKBKB-228ENST00000523517 TMEM79Q9BSE2 394 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms