RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZNF571Q7Z3V5 609 aaPredicted RBP15.45■□□□□ 0.06
MRPS28-209ENST00000522987 HEATR4Q86WZ0 1026 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 PGBD5Q8N414 524 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 SNRNP27Q8WVK2 155 aaKnown RBP15.45■□□□□ 0.06
MRPS28-209ENST00000522987 EXTL1Q92935 676 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 USP7Q93009 1102 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 SEPT3Q9UH03 358 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 PLEKHM1Q9Y4G2 1056 aa15.45■□□□□ 0.06
MRPS28-209ENST00000522987 B8ZZF3 427 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 DDX3XO00571 662 aaKnown RBP eCLIP15.44■□□□□ 0.069e-10■■□□□ 11.7
MRPS28-209ENST00000522987 SLC28A2O43868 658 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 FUCA1P04066 466 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 KELP23276 732 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 IL1R2P27930 398 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 CCKBRP32239 447 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 ETV3P41162 512 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
MRPS28-209ENST00000522987 CYP4F2P78329 520 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TYRO3Q06418 890 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TRAF2Q12933 501 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 NFATC3Q12968 1075 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 DPYSQ14117 519 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
MRPS28-209ENST00000522987 C16orf72Q14CZ0 275 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TMCO4Q5TGY1 634 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TXNRD3NBQ6F5E7 133 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 OGFOD3Q6PK18 319 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 SLC30A9Q6PML9 568 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 PRICKLE2Q7Z3G6 844 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 HSD11B1LQ7Z5J1 315 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TSPAN33Q86UF1 283 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 EXD3Q8N9H8 876 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 RCBTB1Q8NDN9 531 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 FNIP1Q8TF40 1166 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 MED8Q96G25 268 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 WBP1Q96G27 269 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 COQ10AQ96MF6 247 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 NUDT22Q9BRQ3 303 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 TRIM4Q9C037 500 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 NOD2Q9HC29 1040 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 DONSONQ9NYP3 566 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 CD84Q9UIB8 345 aa15.44■□□□□ 0.06
MRPS28-209ENST00000522987 LRRC10BA6NIK2 292 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 B4GAT1O43505 415 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 CCL4P13236 92 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 WT1P19544 449 aaPredicted RBP15.43■□□□□ 0.06
MRPS28-209ENST00000522987 LHCGRP22888 699 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 MPSTP25325 297 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 VIPR1P32241 457 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 TRIM23P36406 574 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 MLLT3P42568 568 aaPredicted RBP15.43■□□□□ 0.06
MRPS28-209ENST00000522987 AP1S1P61966 158 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 EIF3IQ13347 325 aaKnown RBP15.43■□□□□ 0.06
MRPS28-209ENST00000522987 ANO6Q4KMQ2 910 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 CLEC17AQ6ZS10 378 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 TRIM74Q86UV6 250 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 NRROSQ86YC3 692 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 OR6C4Q8NGE1 309 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 ZDHHC1Q8WTX9 485 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 PSKH2Q96QS6 385 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 PHPT1Q9NRX4 125 aaPredicted RBP15.43■□□□□ 0.06
MRPS28-209ENST00000522987 APPL1Q9UKG1 709 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 PCDHGA7Q9Y5G6 932 aa15.43■□□□□ 0.06
MRPS28-209ENST00000522987 TRBV23OR9-2A0A075B6M9 112 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 NPIPB15A6NHN6 443 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 RHPN2P1A8MT19 583 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 C9orf172C9J069 976 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 H3BRJ5 948 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 TMX2-CTNND1H3BSU7 103 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 HEXIM1O94992 359 aaKnown RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 ECEL1O95672 775 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 FGF1P05230 155 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 CEACAM5P06731 702 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 MYCLP1P12525 358 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 CCNB1P14635 433 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 PPM1FP49593 454 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 RENBPP51606 427 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 B4GALNT1Q00973 533 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 ZFP36L1Q07352 338 aaKnown RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 NSUN2Q08J23 767 aaKnown RBP eCLIP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 KLHL30Q0D2K2 578 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 BIRC2Q13490 618 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 RFTN1Q14699 578 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 LINC00303Q3SY05 128 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 MANEAQ5SRI9 462 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 NKAIN2Q5VXU1 208 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 RAET1GQ6H3X3 334 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 Q6ZVL8 140 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 MARK2Q7KZI7 788 aaKnown RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 ZNF761Q86XN6 746 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 SLITRK4Q8IW52 837 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 PMEPA1Q969W9 287 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 ARHGAP9Q9BRR9 750 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 NT5MQ9NPB1 228 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.42■□□□□ 0.06
MRPS28-209ENST00000522987 TAAR2Q9P1P5 351 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 SUFUQ9UMX1 484 aa15.42■□□□□ 0.06
MRPS28-209ENST00000522987 TMEM98Q9Y2Y6 226 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms