RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ATL2Q8NHH9 583 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 FATE1Q969F0 183 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 RBM15Q96T37 977 aaKnown RBP eCLIP18.7■□□□□ 0.58
SPIDR-220ENST00000522900 LGMNQ99538 433 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CHKBQ9Y259 395 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 TTLL3Q9Y4R7 772 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 DGKBQ9Y6T7 804 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 ANKRD36A6QL64 1941 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 BRINP1O60477 761 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 PRLP01236 227 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 JCHAINP01591 159 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 FUCA1P04066 466 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TNNT1P13805 278 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 RPIAP49247 311 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 LVRNQ6Q4G3 990 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 SARM1Q6SZW1 724 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 NPNTQ6UXI9 565 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TECPR1Q7Z6L1 1165 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 GKN2Q86XP6 184 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 RHOT2Q8IXI1 618 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TC2NQ8N9U0 490 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 KYQ8NBH2 561 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 CCL4L1Q8NHW4 92 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TPCN2Q8NHX9 752 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 PTCD2Q8WV60 388 aaKnown RBP18.69■□□□□ 0.58
SPIDR-220ENST00000522900 GLMNQ92990 594 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 RNF25Q96BH1 459 aaPredicted RBP18.69■□□□□ 0.58
SPIDR-220ENST00000522900 HDAC11Q96DB2 347 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 DTD2Q96FN9 168 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 DCBLD2Q96PD2 775 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 DEPDC7Q96QD5 511 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TRIM5Q9C035 493 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 TMEM168Q9H0V1 697 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 WDR26Q9H7D7 661 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 CYP4F12Q9HCS2 524 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 GPR34Q9UPC5 381 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 HEY1Q9Y5J3 304 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 ITPR1Q14643 2758 aa18.69■□□□□ 0.58
SPIDR-220ENST00000522900 ANKRD11Q6UB99 2663 aaPredicted RBP18.68■□□□□ 0.58
SPIDR-220ENST00000522900 KCNK1O00180 336 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 TNFRSF10CO14798 259 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 USP12O75317 370 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 MPOP05164 745 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 MX2P20592 715 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 PTSQ03393 145 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 ZBTB17Q13105 803 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 ARHGEF7Q14155 803 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 SLC9A4Q6AI14 798 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 USP45Q70EL2 814 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 B4GALNT4Q76KP1 1039 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 HEATR4Q86WZ0 1026 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 CCDC13Q8IYE1 715 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 CNTD1Q8N815 330 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 SCG3Q8WXD2 468 aaKnown RBP18.68■□□□□ 0.58
SPIDR-220ENST00000522900 CCDC3Q9BQI4 270 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 TEX101Q9BY14 249 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 CD84Q9UIB8 345 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 RABGEF1Q9UJ41 708 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 MOSPD1Q9UJG1 213 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 TFR2Q9UP52 801 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 MYLKQ15746 1914 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 KNTC1P50748 2209 aa18.68■□□□□ 0.58
SPIDR-220ENST00000522900 A0A087WV48 116 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 A0A0J9YYE9 177 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 A0A1W2PNU3 283 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-220ENST00000522900 TRBC1P01850 177 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 KRT1P04264 644 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 CEACAM5P06731 702 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 MMP2P08253 660 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 MYCLP1P12525 358 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-220ENST00000522900 COMTP21964 271 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 CES1P23141 567 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 KELP23276 732 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 PPIDQ08752 370 aaKnown RBP18.67■□□□□ 0.58
SPIDR-220ENST00000522900 TCEAL1Q15170 157 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 ISXQ2M1V0 245 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 LRRC38Q5VT99 294 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 LRRC66Q68CR7 880 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 TAF8Q7Z7C8 310 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 SDR16C5Q8N3Y7 309 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 ARL10Q8N8L6 244 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 CRELD1Q96HD1 420 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 TDRD1Q9BXT4 1180 aaKnown RBP18.67■□□□□ 0.58
SPIDR-220ENST00000522900 CEP41Q9BYV8 373 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 SUDS3Q9H7L9 328 aaPredicted RBP18.67■□□□□ 0.58
SPIDR-220ENST00000522900 AMACRQ9UHK6 382 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 INTUQ9ULD6 942 aa18.67■□□□□ 0.58
SPIDR-220ENST00000522900 APC2O95996 2303 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 PRSS38A1L453 326 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 GOLGA6CA6NDK9 693 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 GOLGA6BA6NDN3 693 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 ZNF487B1APH4 448 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 PSMD11O00231 422 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 APOL1O14791 398 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 SOD1P00441 154 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 GOLGA6DP0CG33 693 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 NFKBIAP25963 317 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 ITPKBP27987 946 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 EIF2S3P41091 472 aaKnown RBP18.66■□□□□ 0.58
SPIDR-220ENST00000522900 POLD2P49005 469 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms