RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PRPF39Q86UA1 669 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 GPAT4Q86UL3 456 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ALYREFQ86V81 257 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 TXNRD3Q86VQ6 643 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 FJX1Q86VR8 437 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 SLC9A9Q8IVB4 645 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 LIX1LQ8IVB5 337 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 DCP1BQ8IZD4 617 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 HIPK4Q8NE63 616 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CMASQ8NFW8 434 aaPredicted RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ST8SIA4Q92187 359 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 UPF1Q92900 1129 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 PIGSQ96S52 555 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 MANSC1Q9H8J5 431 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 AGO3Q9H9G7 860 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 RAB23Q9ULC3 237 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 NR2E1Q9Y466 385 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 HSPE1-MOB4S4R3N1 261 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 PIK3C2AO00443 1686 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 SAGE2PA6NJ88 616 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 WRBO00258 174 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 PSMA7O14818 248 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 EPHB6O15197 1021 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 TXNL1O43396 289 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CHMP2AO43633 222 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 EIF1BO60739 113 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CNOT4O95628 575 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 LDOC1O95751 146 aaPredicted RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ATXN8OSP0DMR3 200 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 EIF1P41567 113 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 GATMP50440 423 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 TOB1P50616 345 aaPredicted RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 RAB13P51153 203 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 HNRNPKP61978 463 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CHRNDQ07001 517 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 UBE2SQ16763 222 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 FAM47AQ5JRC9 791 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 FAM160B1Q5W0V3 765 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 C3orf33Q6P1S2 294 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 GALNTL5Q7Z4T8 443 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 C12orf40Q86WS4 652 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 THNSL1Q8IYQ7 743 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 FBXW8Q8N3Y1 598 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 PNPT1Q8TCS8 783 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ZFP90Q8TF47 636 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CPT1BQ92523 772 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ATOH1Q92858 354 aaPredicted RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 C19orf60Q96EN9 201 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CNOT6LQ96LI5 555 aaKnown RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 SERPINB11Q96P15 392 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 EYA3Q99504 573 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 ADPGKQ9BRR6 497 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 EFCAB1Q9HAE3 211 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 NKIRAS2Q9NYR9 191 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 CD274Q9NZQ7 290 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 VSX1Q9NZR4 365 aaPredicted RBP8.31□□□□□ -1.08
HMGB4-204ENST00000522796 SRRDQ9UH36 339 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 METP08581 1390 aa8.31□□□□□ -1.08
HMGB4-204ENST00000522796 NEXMIFQ5QGS0 1516 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 C7orf72A4D263 438 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 E7EWF7 191 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 SNAP23O00161 211 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 DCLK1O15075 740 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CBR3O75828 277 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 BMP4P12644 408 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CD46P15529 392 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 ZNF250P15622 560 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 PTBP1P26599 531 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CAPZA1P52907 286 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 PMS1P54277 932 aaKnown RBP8.3□□□□□ -1.08
HMGB4-204ENST00000522796 SIK1P57059 783 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 ERVFC1P60507 584 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CLN3Q13286 438 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 AAK1Q2M2I8 961 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 SLFN12LQ6IEE8 588 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 FUT10Q6P4F1 479 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 TFAP2DQ7Z6R9 452 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 NT5DC3Q86UY8 548 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CDKL3Q8IVW4 592 aaPredicted RBP8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CCDC105Q8IYK2 499 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 UBQLNLQ8IYU4 475 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 MPP5Q8N3R9 675 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 ZNF276Q8N554 614 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 POC5Q8NA72 575 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 Q8NFD4 153 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CLHC1Q8NHS4 586 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 PDCD6IPQ8WUM4 868 aaKnown RBP8.3□□□□□ -1.08
HMGB4-204ENST00000522796 CCDC124Q96CT7 223 aaKnown RBP8.3□□□□□ -1.08
HMGB4-204ENST00000522796 SGTBQ96EQ0 304 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 QRFPRQ96P65 431 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 KCNK16Q96T55 309 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 RACGAP1Q9H0H5 632 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 AAASQ9NRG9 546 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 GSN-AS1Q9NRJ2 163 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 COPG2Q9UBF2 871 aa8.3□□□□□ -1.08
HMGB4-204ENST00000522796 FAM198AQ9UFP1 575 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms