RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NAA16Q6N069 864 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 CPLX2Q6PUV4 134 aaKnown RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 LINGO2Q7L985 606 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 WDR63Q8IWG1 891 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 SFTPA2Q8IWL1 248 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 ADGRF4Q8IZF3 695 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 DPP10Q8N608 796 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 POC5Q8NA72 575 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 HUS1BQ8NHY5 278 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 IGSF8Q969P0 613 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 TUBB6Q9BUF5 446 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 NUF2Q9BZD4 464 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 NPFFR1Q9GZQ6 430 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 CDT1Q9H211 546 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 KCNN2Q9H2S1 579 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 RANGRFQ9HD47 186 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 MKKSQ9NPJ1 570 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 OGFRQ9NZT2 677 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 FAM169AQ9Y6X4 670 aa4.8□□□□□ -1.64
HMGB1P1-201ENST00000522557 A0A1W2PPC1 479 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 DPPA5A6NC42 116 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 GAGE12JA6NER3 117 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 CD8B2A6NJW9 211 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 KRTAP29-1A8MX34 341 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 H3BNX3 289 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 H7C0S8 307 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 WNT9BO14905 357 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 DAB1O75553 588 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 NKX2-2O95096 273 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 TRIM21P19474 475 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 CAMPP49913 170 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 RASSF2P50749 326 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ADORA2A-AS1P86434 159 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ROR1Q01973 937 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 CXCL9Q07325 125 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 SPOCK1Q08629 439 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 CDC16Q13042 620 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 C2orf68Q2NKX9 166 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 C6orf10Q5SRN2 563 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 RARS2Q5T160 578 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 KRT79Q5XKE5 535 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 FBXO46Q6PJ61 603 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 TMCO3Q6UWJ1 677 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 COLCA1Q6ZS62 124 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 PIM3Q86V86 326 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 KBTBD6Q86V97 674 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 HACE1Q8IYU2 909 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 MMP21Q8N119 569 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 C17orf53Q8N3J3 647 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZBTB2Q8N680 514 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 SLC44A5Q8NCS7 719 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ENGASEQ8NFI3 743 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 BEST2Q8NFU1 509 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 NSMCE1Q8WV22 266 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 PRPF31Q8WWY3 499 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 TMEM18Q96B42 140 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF419Q96HQ0 510 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ABHD1Q96SE0 405 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 MAK16Q9BXY0 300 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 EBF3Q9H4W6 596 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 AAMDCQ9H7C9 122 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 RRP7BPQ9NSQ0 103 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZBTB40Q9NUA8 1239 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 C5AR2Q9P296 337 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 EXO1Q9UQ84 846 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 WBP11Q9Y2W2 641 aaKnown RBP4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 CEPT1Q9Y6K0 416 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 SQORQ9Y6N5 450 aa4.79□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF644Q9H582 1327 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 ADAMDEC1O15204 470 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 MITFO75030 526 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 SOX30O94993 753 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 CLTBP09497 229 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 SNHG28P0DPA3 235 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF182P17025 639 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 TNFRSF1BP20333 461 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 CIITAP33076 1130 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 PPP3CCP48454 512 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 NRIP1P48552 1158 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 CLCN5P51795 746 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 SELENOVP59797 346 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZBED6P86452 979 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 RASA2Q15283 850 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 NTRK2Q16620 822 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 PRAMEF19Q5SWL8 479 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 MFSD4BQ5TF39 518 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 ARMC3Q5W041 872 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 HMBOX1Q6NT76 420 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 TAGAPQ8N103 731 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 HORMAD2Q8N7B1 307 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 GPT2Q8TD30 523 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 DUSP19Q8WTR2 217 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 ZNF333Q96JL9 665 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 SIN3AQ96ST3 1273 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 BAG1Q99933 345 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 TMEM47Q9BQJ4 181 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 AP1M1Q9BXS5 423 aa4.78□□□□□ -1.64
HMGB1P1-201ENST00000522557 MRPL1Q9BYD6 325 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms