RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 PLEKHG6Q3KR16 790 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 TECRLQ5HYJ1 363 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 KLC3Q6P597 504 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 ZNF549Q6P9A3 640 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 MAVSQ7Z434 540 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 ZNF781Q8N8C0 355 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 USP13Q92995 863 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 NSL1Q96IY1 281 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 LBHD1Q9BQE6 289 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 HTATIP2Q9BUP3 242 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 KLC4Q9NSK0 619 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 PCDHB9Q9Y5E1 797 aa18.49■□□□□ 0.55
TRAPPC9-210ENST00000521667 GRXCR1A8MXD5 290 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 TRAFD1O14545 582 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 SMAD6O43541 496 aaKnown RBP18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 MOSPD3O75425 235 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 KRT16P08779 473 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 EPHB1P54762 984 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 NAGLUP54802 743 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 ARHGAP15Q53QZ3 475 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 C9orf50Q5SZB4 431 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 METTL3Q86U44 580 aaKnown RBP18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 ANKRD49Q8WVL7 239 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 PTCD3Q96EY7 689 aaKnown RBP18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 CDH19Q9H159 772 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 ABCB8Q9NUT2 735 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 DENND4CQ5VZ89 1909 aa18.48■□□□□ 0.55
TRAPPC9-210ENST00000521667 ZNF195O14628 629 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 RHOP08100 348 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 SERPINA6P08185 405 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 RBP1P09455 135 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PRSS56P0CW18 603 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PLK1P53350 603 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 TUBB3Q13509 450 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 RCN2Q14257 317 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 ACAP2Q15057 778 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 ARMC12Q5T9G4 340 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 FAM109BQ6ICB4 259 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 TTC30BQ8N4P2 665 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 MYO19Q96H55 970 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 RAB3IPQ96QF0 476 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 TCF12Q99081 682 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 ILKAPQ9H0C8 392 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 POLR3BQ9NW08 1133 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 ARMCX1Q9P291 453 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 INTS6Q9UL03 887 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 APOBEC2Q9Y235 224 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 LAMA3Q16787 3333 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 C5orf67F2Z3F1 127 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 STX7O15400 261 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 MGRN1O60291 552 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PGLSO95336 258 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 ATP5F1P24539 256 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PTPN4P29074 926 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 HOXA9P31269 272 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 IRS1P35568 1242 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 MAPK8P45983 427 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 CSNK1DP48730 415 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 IDH3AP50213 366 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PFKPQ01813 784 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 SLC20A2Q08357 652 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 TMEM207Q6UWW9 146 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 PIM3Q86V86 326 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 SPNS2Q8IVW8 549 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 SGF29Q96ES7 293 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 AARSD1Q9BTE6 412 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 MTIF3Q9H2K0 278 aaKnown RBP18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 POPDC3Q9HBV1 291 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 FKBPLQ9UIM3 349 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 RAP2CQ9Y3L5 183 aa18.47■□□□□ 0.55
TRAPPC9-210ENST00000521667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 CHRNGP07510 517 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 CALB2P22676 271 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 SUOXP51687 545 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 ALDH18A1P54886 795 aaKnown RBP18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 DNAJB13P59910 316 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 USP4Q13107 963 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 CAMK1Q14012 370 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 PTPRRQ15256 657 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 CAMK1DQ8IU85 385 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 TXNDC5Q8NBS9 432 aaKnown RBP18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 OR6K2Q8NGY2 324 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 RIN3Q8TB24 985 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 MOCOSQ96EN8 888 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 LMLNQ96KR4 655 aa18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 EVLQ9UI08 416 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC9-210ENST00000521667 CDH23Q9H251 3354 aa18.46■□□□□ 0.54
TRAPPC9-210ENST00000521667 CXorf51AA0A1B0GTR3 108 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 CAPN14A8MX76 684 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 GRM6O15303 877 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 EPCAMP16422 314 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 HNRNPH1P31943 449 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 MC4RP32245 332 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 TIAL1Q01085 375 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 BCL2L1Q07817 233 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLC5A9Q2M3M2 681 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 ARL13AQ5H913 290 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 PITRM1Q5JRX3 1037 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 CFAP157Q5JU67 520 aa18.45■□□□□ 0.54
TRAPPC9-210ENST00000521667 PARP9Q8IXQ6 854 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms