RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	CBARP	Q8N350	705 aa	Predicted RBP	18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	SCRN2	Q96FV2	425 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	FEM1C	Q96JP0	617 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	AP1M1	Q9BXS5	423 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	PCDH9	Q9HC56	1237 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	PCDH12	Q9NPG4	1184 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	FAM153A	Q9UHL3	310 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	TPX2	Q9ULW0	747 aa	Known RBP	18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	RPL26L1	Q9UNX3	145 aa	Known RBP	18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	CHKB	Q9Y259	395 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	ITM2B	Q9Y287	266 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	ITPR1	Q14643	2758 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	DOCK9	Q9BZ29	2069 aa		18.21	■□□□□ 0.51
VEGFA-222	ENST00000520948	KNL1	Q8NG31	2342 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	LOC285095	A0A1B0GVY8	99 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	RNGTT	O60942	597 aa	Known RBP	18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	DKK1	O94907	266 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	CP	P00450	1065 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	MMP12	P39900	470 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	GRK6	P43250	576 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	KCNJ1	P48048	391 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	CCT8	P50990	548 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	ELP6	Q0PNE2	266 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	MPP3	Q13368	585 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	PARP6	Q2NL67	630 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	CFAP58	Q5T655	872 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	HORMAD1	Q86X24	394 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	GLIS1	Q8NBF1	620 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	MRGPRX2	Q96LB1	330 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	SLC6A18	Q96N87	628 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	MCCC1	Q96RQ3	725 aa	Predicted RBP	18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	MLPH	Q9BV36	600 aa	Predicted RBP	18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	C1QTNF2	Q9BXJ5	285 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	UBP1	Q9NZI7	540 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	RSPH14	Q9UHP6	348 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948	CELSR3	Q9NYQ7	3312 aa		18.2	■□□□□ 0.5
VEGFA-222	ENST00000520948		A0A0J9YYE9	177 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948		A0A1W2PPC4	97 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948		A0A1W2PQU0	124 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	PCDH8	O95206	1070 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	METTL18	O95568	372 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	EPO	P01588	193 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	TRBC1	P01850	177 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	PRKCG	P05129	697 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	CA4	P22748	312 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	PSMB4	P28070	264 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	CTSK	P43235	329 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	CDK18	Q07002	472 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	RALGDS	Q12967	914 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	ZNF284	Q2VY69	593 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	LRRK1	Q38SD2	2015 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	PRAMEF14	Q5SWL7	426 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	KIAA1161	Q6NSJ0	714 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	TTC27	Q6P3X3	843 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	DPPA4	Q7L190	304 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	ZSCAN30	Q86W11	494 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	ATL2	Q8NHH9	583 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	ASB12	Q8WXK4	309 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	C16orf45	Q96MC5	204 aa	Predicted RBP	18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	RNF14	Q9UBS8	474 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	CABIN1	Q9Y6J0	2220 aa		18.19	■□□□□ 0.5
VEGFA-222	ENST00000520948	ANKRD66	B4E2M5	251 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	PDE2A	O00408	941 aa	Predicted RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	TNFSF14	O43557	240 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	PMPCB	O75439	489 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	ANXA9	O76027	345 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	TUBB4A	P04350	444 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	ETS1	P14921	441 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	XPA	P23025	273 aa	Predicted RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	ADRA1A	P35348	466 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	COIL	P38432	576 aa	Predicted RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	GEM	P55040	296 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	WNT3A	P56704	352 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	RPS21	P63220	83 aa	Known RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	CYP4F3	Q08477	520 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	FGL2	Q14314	439 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	AGER	Q15109	404 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	PTPRR	Q15256	657 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	QPCT	Q16769	361 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	SEL1L3	Q68CR1	1132 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	KCTD11	Q693B1	232 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	ERAP2	Q6P179	960 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	DHRS13	Q6UX07	377 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	LIPI	Q6XZB0	460 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	PRUNE1	Q86TP1	453 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	MAGOHB	Q96A72	148 aa	Known RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	SMIM14	Q96QK8	99 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	LYSMD1	Q96S90	227 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	B4GALT6	Q9UBX8	382 aa		18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	AAR2	Q9Y312	384 aa	Known RBP	18.18	■□□□□ 0.5
VEGFA-222	ENST00000520948	TRPM6	Q9BX84	2022 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	TRABD2B	A6NFA1	517 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	IGLON5	A6NGN9	336 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948		F5H423	210 aa	Predicted RBP	18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	PCDHGA12	O60330	932 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	MMP20	O60882	483 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	PHF2	O75151	1096 aa		18.17	■□□□□ 0.5
VEGFA-222	ENST00000520948	NDST3	O95803	873 aa		18.17	■□□□□ 0.5

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