RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 A0A1B0GVM2 712 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 TCAF2A6NFQ2 919 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SNNO75324 88 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 HIST1H2AGP0C0S8 130 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 HIST1H2ADP20671 130 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 EEF1DP29692 281 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 MAGEA11P43364 429 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 HTRA3P83110 453 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 IL1RL1Q01638 556 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SERINC3Q13530 473 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 PABPC1LQ4VXU2 614 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 METTL21CQ5VZV1 264 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 LPCAT4Q643R3 524 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 RANBP10Q6VN20 620 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 METTL6Q8TCB7 284 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 STYXQ8WUJ0 223 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ERLEC1Q96DZ1 483 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 IMP4Q96G21 291 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 HIST1H2AHQ96KK5 128 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 TSC22D3Q99576 134 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 HIST1H2AJQ99878 128 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 H2AFJQ9BTM1 129 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CIPCQ9C0C6 399 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 KLHL4Q9C0H6 718 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CROTQ9UKG9 612 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CCNT2O60583 730 aaKnown RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 GJA1P17302 382 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TXNDC8Q6A555 127 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TAS1R1Q7RTX1 841 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 DNAJB7Q7Z6W7 309 aaPredicted RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 SPNS2Q8IVW8 549 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 MYO1HQ8N1T3 1032 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CDYL2Q8N8U2 506 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 KLHDC9Q8NEP7 349 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 OR6Y1Q8NGX8 325 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 NAT14Q8WUY8 206 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 NCLNQ969V3 563 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CDKN2AIPNLQ96HQ2 116 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 RPL10LQ96L21 214 aaKnown RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 RIC8BQ9NVN3 520 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 MARCH4Q9P2E8 410 aaPredicted RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 STX18Q9P2W9 335 aaKnown RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 SQORQ9Y6N5 450 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 RLFQ13129 1914 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 HGFP14210 728 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 ZNF7P17097 686 aaPredicted RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 GLDCP23378 1020 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 FOXD4Q12950 439 aaPredicted RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 NR6A1Q15406 480 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 RPAINQ86UA6 219 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 FBXW8Q8N3Y1 598 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TXNDC5Q8NBS9 432 aaKnown RBP10.16□□□□□ -0.78
MCF2-209ENST00000520602 LINGO1Q96FE5 620 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 HBEGFQ99075 208 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TRIM15Q9C019 465 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TNKS2Q9H2K2 1166 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 GID8Q9NWU2 228 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CPQQ9Y646 472 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 ENO4A6NNW6 628 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 B4GALT3O60512 393 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 GJB3O75712 270 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 IL10P22301 178 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 TTPAP49638 278 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 PSME3P61289 254 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 NFYCQ13952 458 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 ACAP2Q15057 778 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CLYBLQ8N0X4 340 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 FNDC5Q8NAU1 212 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CNBD2Q96M20 576 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 SEMA6AQ9H2E6 1030 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 CFAP97Q9P2B7 532 aa10.16□□□□□ -0.78
MCF2-209ENST00000520602 RBBP6Q7Z6E9 1792 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 NPEPPSL1A6NEC2 478 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 A8MT66 165 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 AZIN1O14977 448 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 SYNCRIPO60506 623 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 SEC24DO94855 1032 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 SNRPB2P08579 225 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 ACRP10323 421 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 HOXB8P17481 243 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 ATP6V1C1P21283 382 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 TSNQ15631 228 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 POM121L1PQ3SYA9 428 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ADGRF1Q5T601 910 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 PAQR3Q6TCH7 311 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 LCA5Q86VQ0 697 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 CILP2Q8IUL8 1156 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 HJURPQ8NCD3 748 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 C2CD4AQ8NCU7 369 aaPredicted RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 MAPK15Q8TD08 544 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 DIS3LQ8TF46 1054 aaKnown RBP10.15□□□□□ -0.78
MCF2-209ENST00000520602 FEM1CQ96JP0 617 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 RTKNQ9BST9 563 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 SLC25A23Q9BV35 468 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 MRGBPQ9NV56 204 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 SPG21Q9NZD8 308 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 ARID2Q68CP9 1835 aa10.15□□□□□ -0.78
MCF2-209ENST00000520602 RGPD3A6NKT7 1758 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms