RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ZBTB14O43829 449 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 BCAS2O75934 225 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 KRT34O76011 436 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 VAPBO95292 243 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PIGNO95427 931 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PRKCGP05129 697 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 LAMP2P13473 410 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ENO3P13929 434 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 STMN1P16949 149 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ERCC2P18074 760 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 TFE3P19532 575 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 NFKB1P19838 968 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 CD72P21854 359 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PAX3P23760 479 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 FSHRP23945 695 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ATP5F1P24539 256 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 MPSTP25325 297 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PMLP29590 882 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ADRA1BP35368 520 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 RPS6KA3P51812 740 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 DNAJB13P59910 316 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 RAB10P61026 200 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 STX1BP61266 288 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 NME3Q13232 169 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 MSLNQ13421 630 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PTK2BQ14289 1009 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 UBXN2BQ14CS0 331 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 USP41Q3LFD5 358 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC9B1Q4ZJI4 515 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PIGGQ5H8A4 983 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PCID2Q5JVF3 399 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 KIAA0319Q5VV43 1072 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 KCTD11Q693B1 232 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 TIGD7Q6NT04 549 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PRMT9Q6P2P2 845 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 BORAQ6PGQ7 559 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PARM1Q6UWI2 310 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 LIMS2Q7Z4I7 341 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 CNTN4Q8IWV2 1026 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PHTF2Q8N3S3 785 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ATPAF2Q8N5M1 289 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 LZTR1Q8N653 840 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 HIPK4Q8NE63 616 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 CEP70Q8NHQ1 597 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 CALML6Q8TD86 181 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 DGCR14Q96DF8 476 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 TSGA13Q96PP4 275 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 LENG8Q96PV6 779 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 MRPL57Q9BQC6 102 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 PAAF1Q9BRP4 392 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 TRMOQ9BU70 441 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 RPP25Q9BUL9 199 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 KIFC1Q9BW19 673 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 MRPL46Q9H2W6 279 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF385DQ9H6B1 395 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 ZBTB26Q9HCK0 441 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 TRPC7Q9HCX4 862 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 IARS2Q9NSE4 1012 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 SPATA6Q9NWH7 488 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC17A6Q9P2U8 582 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 CIDEBQ9UHD4 219 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC39A10Q9ULF5 831 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 AP4B1Q9Y6B7 739 aa8.67□□□□□ -1.02
CTNNA1-223ENST00000520520 SYNJ2BP-COX16A0A087WUM0 186 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 ARHGEF37A1IGU5 675 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 HEATR9A2RTY3 570 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 BBIP1A8MTZ0 92 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 KCNK1O00180 336 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 NEMP1O14524 444 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 PPEF2O14830 753 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 SRP72O76094 671 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 PDGFRBP09619 1106 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 SP9P0CG40 484 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 LRPAP1P30533 357 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 CD151P48509 253 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 LHX1P48742 406 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 ATP4BP51164 291 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 TKTL1P51854 596 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 ATXN1P54253 815 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 NR1H2P55055 460 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 DAOAP59103 153 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 POU4F1Q01851 419 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 DSC1Q08554 894 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 TRAP1Q12931 704 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 DLG1Q12959 904 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 USP4Q13107 963 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 SEMA3BQ13214 749 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 HTR4Q13639 388 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 LRRC36Q1X8D7 754 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF423Q2M1K9 1284 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 FAM83EQ2M2I3 478 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 LSM12Q3MHD2 195 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 SPATS1Q496A3 300 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 XKR4Q5GH76 650 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 VWA5B1Q5TIE3 1220 aa8.66□□□□□ -1.02
CTNNA1-223ENST00000520520 OTUD1Q5VV17 481 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms