RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 BOLA3Q53S33 107 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 TDRD12Q587J7 1177 aaKnown RBP15.19■□□□□ 0.02
CSMD1-207ENST00000520451 SPECC1LQ69YQ0 1117 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 OGFOD3Q6PK18 319 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 SFTPA2Q8IWL1 248 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 BBS5Q8N3I7 341 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 PGBD5Q8N414 524 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 ATPAF2Q8N5M1 289 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 CCL4L1Q8NHW4 92 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 SNRNP27Q8WVK2 155 aaKnown RBP15.19■□□□□ 0.02
CSMD1-207ENST00000520451 SPOCK2Q92563 424 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 MGME1Q9BQP7 344 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 DPEP2Q9H4A9 486 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 NOD2Q9HC29 1040 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 LRIT1Q9P2V4 623 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 APPL1Q9UKG1 709 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 ATXN7L1Q9ULK2 861 aaPredicted RBP15.19■□□□□ 0.02
CSMD1-207ENST00000520451 RNF215Q9Y6U7 377 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 ZNF462Q96JM2 2506 aa15.19■□□□□ 0.02
CSMD1-207ENST00000520451 K7ENP7 123 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 MAFKO60675 156 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 HEXIM1O94992 359 aaKnown RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 SERPINC1P01008 464 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 JMJD7P0C870 316 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 RARAP10276 462 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 CYP2A6P11509 494 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 NFKBIAP25963 317 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 SLC5A2P31639 672 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 MAXP61244 160 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 TRAF2Q12933 501 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 ARHGEF7Q14155 803 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 PIGHQ14442 188 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 HLTFQ14527 1009 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 INO80CQ6PI98 192 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 CCDC81Q6ZN84 652 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 SPRED1Q7Z699 444 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 ZNF605Q86T29 641 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 HEATR4Q86WZ0 1026 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 KIAA1524Q8TCG1 905 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 NSMCE1Q8WV22 266 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 WBP1Q96G27 269 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 CARS2Q9HA77 564 aaKnown RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 PHPT1Q9NRX4 125 aaPredicted RBP15.18■□□□□ 0.02
CSMD1-207ENST00000520451 KCTD5Q9NXV2 234 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 PISDQ9UG56 409 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 LOXL2Q9Y4K0 774 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 PCDHGA7Q9Y5G6 932 aa15.18■□□□□ 0.02
CSMD1-207ENST00000520451 GOLGA6CA6NDK9 693 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 GOLGA6BA6NDN3 693 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 AGRPO00253 132 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 GOLGA6DP0CG33 693 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 PLA2G2AP14555 144 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 PNLIPP16233 465 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 LHCGRP22888 699 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 SERPINB6P35237 376 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 ETV3P41162 512 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 MMP13P45452 471 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 CDH6P55285 790 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 NR1I3Q14994 352 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 KIAA1614Q5VZ46 1190 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 TXNRD3NBQ6F5E7 133 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 CAVIN1Q6NZI2 390 aaKnown RBP15.17■□□□□ 0.02
CSMD1-207ENST00000520451 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 TEKT4Q8WW24 435 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 TTC9Q92623 222 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 DTD2Q96FN9 168 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 BTBD6Q96KE9 485 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 CCNL2Q96S94 520 aaPredicted RBP15.17■□□□□ 0.02
CSMD1-207ENST00000520451 TEX101Q9BY14 249 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 THAP2Q9H0W7 228 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 PCDH18Q9HCL0 1135 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 GOLGA6AQ9NYA3 693 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
CSMD1-207ENST00000520451 CAPN8A6NHC0 703 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 NPIPB15A6NHN6 443 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 NUDT21O43809 227 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 PGLSO95336 258 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 ZIC2O95409 532 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 CEACAM5P06731 702 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 CCNB1P14635 433 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 GNPDA1P46926 289 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 MAZP56270 477 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 CDK3Q00526 305 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 SLC25A11Q02978 314 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 ZFP36L1Q07352 338 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 ILF3Q12906 894 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 LY6DQ14210 128 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 KRT81Q14533 505 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 IQCB1Q15051 598 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 MAP9Q49MG5 647 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 FIGNQ5HY92 759 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 RALGPS1Q5JS13 557 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 ARMC12Q5T9G4 340 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 HGSNATQ68CP4 663 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 RAET1GQ6H3X3 334 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 USP45Q70EL2 814 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 TSPAN33Q86UF1 283 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 NIPA2Q8N8Q9 360 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 GPBAR1Q8TDU6 330 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms