RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TNNT1P13805 278 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 GPR1P46091 355 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 CCL7P80098 99 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 DPYSL3Q14195 570 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 MESDQ14696 234 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 PTPRRQ15256 657 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 SOWAHCQ53LP3 525 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 ANKRD20A8PQ5CZ79 823 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 NCBP2-AS2Q69YL0 99 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 HSD11B1LQ7Z5J1 315 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 TSPAN33Q86UF1 283 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 ARL14Q8N4G2 192 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 WDR36Q8NI36 951 aaKnown RBP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 LRRN4Q8WUT4 740 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 COQ10AQ96MF6 247 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 RBM15Q96T37 977 aaKnown RBP eCLIP16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 PACSIN1Q9BY11 444 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 FOXP3Q9BZS1 431 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 STRADBQ9C0K7 418 aa16.15■□□□□ 0.18
IGHV3-42-201ENST00000520410 CFAP47Q6ZTR5 3102 aa16.14■□□□□ 0.18
IGHV3-42-201ENST00000520410 LRRK1Q38SD2 2015 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 CCDC187A0A096LP49 1063 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 A0A0U1RQS6 177 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 HTRA2O43464 458 aaPredicted RBP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 PROSCO94903 275 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 TNFSF15O95150 251 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 PEX11BO96011 259 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 KRT7P08729 469 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 CR2P20023 1033 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 CA4P22748 312 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 DSC2Q02487 901 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 ILF3Q12906 894 aaKnown RBP eCLIP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 TRIM14Q14142 442 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 PDK2Q15119 407 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 IFI16Q16666 785 aaKnown RBP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 MAP9Q49MG5 647 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 RALGPS1Q5JS13 557 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 CCNJLQ8IV13 435 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 PELI3Q8N2H9 469 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 LPCAT1Q8NF37 534 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 OR6C4Q8NGE1 309 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 CCL4L1Q8NHW4 92 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 DTD2Q96FN9 168 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 UBL7Q96S82 380 aaPredicted RBP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 RBM22Q9NW64 420 aaKnown RBP eCLIP16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 UVRAGQ9P2Y5 699 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 DGKBQ9Y6T7 804 aa16.14■□□□□ 0.17
IGHV3-42-201ENST00000520410 PKD1L2Q7Z442 2459 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 WDFY3Q8IZQ1 3526 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 PMS2P1A4D2B8 440 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 ASMTLO95671 621 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 JMJD7P0C870 316 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 GM2AP17900 193 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LHCGRP22888 699 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 INHBCP55103 352 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 TMPRSS3P57727 454 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 TAS2R40P59535 323 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 ERVPABLB-1P60509 514 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 TLE3Q04726 772 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 SLC18A3Q16572 532 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 C14orf28Q4W4Y0 310 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LRRC66Q68CR7 880 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 SPECC1LQ69YQ0 1117 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 SLC30A9Q6PML9 568 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 Q6ZVL8 140 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 MARK2Q7KZI7 788 aaKnown RBP16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 GPR155Q7Z3F1 870 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LRRC49Q8IUZ0 686 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 RNF214Q8ND24 703 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 GRAMD1AQ96CP6 724 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 ZNF670Q9BS34 389 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 GSDMCQ9BYG8 508 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LRRN3Q9H3W5 708 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LRIT1Q9P2V4 623 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 ATXN7L1Q9ULK2 861 aaPredicted RBP16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 CHKBQ9Y259 395 aa16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 ARID1BQ8NFD5 2236 aaPredicted RBP16.13■□□□□ 0.17
IGHV3-42-201ENST00000520410 RHPN2P1A8MT19 583 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 D6RAR5 112 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 TNFRSF10CO14798 259 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 SLC4A1P02730 911 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 KRT1P04264 644 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 PDHA1P08559 390 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 MX2P20592 715 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 CDK3Q00526 305 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 GALNT2Q10471 571 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 PAFAH1B3Q15102 231 aaKnown RBP16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 AMZ1Q400G9 498 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 PHF19Q5T6S3 580 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 ARHGAP40Q5TG30 622 aa16.12■□□□□ 0.17
IGHV3-42-201ENST00000520410 B3GNT8Q7Z7M8 397 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms