RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MXI1P50539 228 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CCNHP51946 323 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PGDP52209 483 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 RAC1P63000 192 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 YWHAZP63104 245 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 GPLD1P80108 840 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TAGLNQ01995 201 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 RAD51Q06609 339 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PPP3CAQ08209 521 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ELP6Q0PNE2 266 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FOXD4Q12950 439 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 BIRC2Q13490 618 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 MTM1Q13496 603 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 EIF4EBP2Q13542 120 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 AUHQ13825 339 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 RAPGEF1Q13905 1077 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 SLC39A14Q15043 492 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 LRRC14Q15048 493 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CNGA2Q16280 664 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 MEA1Q16626 185 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ALG11Q2TAA5 492 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 EIF2S3LQ2VIR3 472 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF805Q5CZA5 627 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ZC3H12AQ5D1E8 599 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CARD16Q5EG05 197 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TAF3Q5VWG9 929 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PAPD7Q5XG87 772 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 SPECC1LQ69YQ0 1117 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FBXL22Q6P050 247 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PMF1Q6P1K2 205 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 C16orf46Q6P387 395 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TAF8Q7Z7C8 310 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CIR1Q86X95 450 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FAM129CQ86XR2 697 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 IRF2BP1Q8IU81 584 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FAM186BQ8IYM0 893 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 NRSN1Q8IZ57 195 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TP53I13Q8NBR0 393 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CHST14Q8NCH0 376 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 RCBTB1Q8NDN9 531 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FAM46DQ8NEK8 389 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 UBA3Q8TBC4 463 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ISG20Q96AZ6 181 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 CEP63Q96MT8 703 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 MED15Q96RN5 788 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PANK2Q9BZ23 570 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 SPRY4Q9C004 299 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 KCTD10Q9H3F6 313 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 DPEP2Q9H4A9 486 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 RDH14Q9HBH5 336 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 BRD7Q9NPI1 651 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 FBXO8Q9NRD0 319 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 XPO7Q9UIA9 1087 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TLK1Q9UKI8 766 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 G3BP2Q9UN86 482 aaKnown RBP4.92□□□□□ -1.62
SDCBP-207ENST00000520168 SMC3Q9UQE7 1217 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 TRAF3IP3Q9Y228 551 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 PCDHGA6Q9Y5G7 932 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ATP6V1DQ9Y5K8 247 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 SVILO95425 2214 aa4.92□□□□□ -1.62
SDCBP-207ENST00000520168 ILVBLA1L0T0 632 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 B4DGG1 531 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 CACNB4O00305 520 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SMAD6O43541 496 aaKnown RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PRMT3O60678 531 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 DPM1O60762 260 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PPP6R2O75170 966 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF821O75541 412 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 STK17BO94768 372 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 DLGAP3O95886 979 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 GSRP00390 522 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MYL1P05976 194 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 GLI1P08151 1106 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 HOXC4P09017 264 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TRIM49P0CI25 452 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TRIM49CP0CI26 452 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 NR1D1P20393 614 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 NR2F2P24468 414 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ITGA3P26006 1051 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ALDH4A1P30038 563 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 PTGER4P35408 488 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ETFBP38117 255 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 STAT1P42224 750 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 NUMBP49757 651 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 RGS7P49802 495 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 KIAA1024LP59773 190 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SNRPD1P62314 119 aaKnown RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 CDK17Q00537 523 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 MC2RQ01718 297 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 SEMA5AQ13591 1074 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 CUL2Q13617 745 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 POLD3Q15054 466 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 IRF4Q15306 451 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
SDCBP-207ENST00000520168 KLHL40Q2TBA0 621 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 AMZ1Q400G9 498 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 ANKS6Q68DC2 871 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 TMEM71Q6P5X7 295 aa4.91□□□□□ -1.62
SDCBP-207ENST00000520168 CYB5D1Q6P9G0 228 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms