RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ST3GAL1Q11201 340 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 DAZAP2Q15038 168 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CEP78Q5JTW2 689 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 C1orf141Q5JVX7 400 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 EPHA10Q5JZY3 1008 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CLEC17AQ6ZS10 378 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 HIST3H2AQ7L7L0 130 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 HAPLN4Q86UW8 402 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CCDC13Q8IYE1 715 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TDRD5Q8NAT2 981 aaKnown RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 OR14L1PQ8NHC6 308 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 NSMCE1Q8WV22 266 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 SLC35F5Q8WV83 523 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF653Q96CK0 615 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMCO6Q96DC7 493 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 AGAP2Q99490 1192 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 MSTO1Q9BUK6 570 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 NPFFR1Q9GZQ6 430 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 SIL1Q9H173 461 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 MAP6D1Q9H9H5 199 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 MSRB1Q9NZV6 116 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 UBA2Q9UBT2 640 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNHIT2Q9UHR6 403 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 ANAPC2Q9UJX6 822 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 CCL27Q9Y4X3 112 aa5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 TTBK1Q5TCY1 1321 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P46-201ENST00000520062 SMIM35A0A1B0GVV1 85 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 A0A1W2PR77 199 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 A6NNC1 897 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ADAMDEC1O15204 470 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 AVILO75366 819 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 RGS11O94810 467 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 HSPA4LO95757 839 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 IFNA2P01563 188 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 TPOP07202 933 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ABCB1P08183 1280 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 QDPRP09417 244 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 CBSLP0DN79 551 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 CHRNB2P17787 502 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 CBSP35520 551 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 PRCPP42785 496 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 PPP5CP53041 499 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF91Q05481 1191 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 CXCL9Q07325 125 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 GRAPQ13588 217 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 KCNC3Q14003 757 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 PLCB4Q15147 1175 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 PQLC2Q6ZP29 291 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 DENND5BQ6ZUT9 1274 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 DPPA4Q7L190 304 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ANKRD13BQ86YJ7 626 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 GPSM1Q86YR5 675 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ARID3BQ8IVW6 561 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 AGBL3Q8NEM8 1001 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 GSDMBQ8TAX9 411 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 UBE2Q2Q8WVN8 375 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 DPF1Q92782 380 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 ZNF622Q969S3 477 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 MSI2Q96DH6 328 aaKnown RBP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 WDR77Q9BQA1 342 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 SLC28A3Q9HAS3 691 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 RAI2Q9Y5P3 530 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 STON1Q9Y6Q2 735 aa5.41□□□□□ -1.54
HMGB1P46-201ENST00000520062 LOC102723996A0A087X1L8 192 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 TCRBV21S2A2A0A5A6 115 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 E5RJQ4 531 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 CYR61O00622 381 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 PRRG2O14669 202 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 ATG13O75143 517 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 TBCAO75347 108 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 FTCDO95954 541 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 AFPP02771 609 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MYBL1P10243 752 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 ANXA7P20073 488 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 GDF5P43026 501 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 PPP3CCP48454 512 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 RASSF2P50749 326 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 TMPRSS3P57727 454 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 INPP5JQ15735 1006 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 DUSP6Q16828 381 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 C2orf68Q2NKX9 166 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 CCDC184Q52MB2 194 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 LRIF1Q5T3J3 769 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 HECTD3Q5T447 861 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 C1QTNF12Q5T7M4 302 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 DAB2IPQ5VWQ8 1189 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 KRT80Q6KB66 452 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 METTL2BQ6P1Q9 378 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 DLK2Q6UY11 383 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MTSS1LQ765P7 747 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 CACNA2D4Q7Z3S7 1137 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 SLFN11Q7Z7L1 901 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MB21D2Q8IYB1 491 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MCUQ8NE86 351 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 METTL2AQ96IZ6 378 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 SPATA17Q96L03 361 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms