RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ACTR2P61160 394 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 PICALMQ13492 652 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 PYCR3Q53H96 274 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 NXNL2Q5VZ03 156 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 FSTL4Q6MZW2 842 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 TRAF7Q6Q0C0 670 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 VN1R5Q7Z5H4 357 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 KCTD20Q7Z5Y7 419 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 SLC51AQ86UW1 340 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 C8orf59Q8N0T1 100 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 OR9I1Q8NGQ6 314 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 DCAF4Q8WV16 495 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 CDHR1Q96JP9 859 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 AS3MTQ9HBK9 375 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 TOR4AQ9NXH8 423 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MID2Q9UJV3 735 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 AGAP5A6NIR3 686 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 CTDSP2O14595 271 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 SEMA3DO95025 777 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 LDLRP01130 860 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MT-ND1P03886 318 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 HMGCRP04035 888 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 HSD17B1P14061 328 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 AGXTP21549 392 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MGAT1P26572 445 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 NDST1P52848 882 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 TFAMQ00059 246 aaKnown RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 ANO4Q32M45 955 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 OTUD3Q5T2D3 398 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 FAM35AQ86V20 835 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 HID1Q8IV36 788 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 PAPD5Q8NDF8 572 aaKnown RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MCFD2Q8NI22 146 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 BIRC7Q96CA5 298 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 NODALQ96S42 347 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 SLC30A3Q99726 388 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 ANKHQ9HCJ1 492 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 OPTCQ9UBM4 332 aa13.58□□□□□ -0.24
PABPC1-208ENST00000519004 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-208ENST00000519004 CABYRO75952 493 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 PRKACAP17612 351 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 TGFBR1P36897 503 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 ABCG1P45844 678 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 YBX1P67809 324 aaKnown RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 EMX1Q04741 257 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 FAM214AQ32MH5 1076 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 TAF2Q6P1X5 1199 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 ILDR2Q71H61 639 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 GALNT7Q86SF2 657 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 LILRB1Q8NHL6 650 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 RDH11Q8TC12 318 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 CPB2Q96IY4 423 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 ASPSCR1Q9BZE9 553 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 SMOC2Q9H3U7 446 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 WBP11Q9Y2W2 641 aaKnown RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 RGPD3A6NKT7 1758 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-208ENST00000519004 RGPD4Q7Z3J3 1758 aa13.57□□□□□ -0.24
PABPC1-208ENST00000519004 A8MX80 341 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 UBDO15205 165 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 INPP4BO15327 924 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TRIM16O95361 564 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 THRBP10828 461 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 GGT5P36269 586 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 ARSFP54793 590 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SESN2P58004 480 aaPredicted RBP13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TYSND1Q2T9J0 566 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 FAM122CQ6P4D5 195 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CES3Q6UWW8 571 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SMG8Q8ND04 991 aaKnown RBP13.56□□□□□ -0.24
PABPC1-208ENST00000519004 ACVR1CQ8NER5 493 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TFAP2BQ92481 460 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 ROPN1LQ96C74 230 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 RIPOR3Q96MK2 946 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CYTH4Q9UIA0 394 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TEX51A0A1B0GUA7 166 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 EXTL3O43909 919 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SNX2O60749 519 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 KRT19P08727 400 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 MTHFD1P11586 935 aaKnown RBP13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CYP2A7P20853 494 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TGM2P21980 687 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SPRP35270 261 aaPredicted RBP13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CRKLP46109 303 aaKnown RBP13.56□□□□□ -0.24
PABPC1-208ENST00000519004 ALDH3A2P51648 485 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 PRKCEQ02156 737 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms