RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C2orf68Q2NKX9 166 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 GGNBP1Q5YKI7 109 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 CFAP161Q6P656 301 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 GLDNQ6ZMI3 551 aaPredicted RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 QSOX2Q6ZRP7 698 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 RNF168Q8IYW5 571 aaPredicted RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 PELI3Q8N2H9 469 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 TTC39CQ8N584 583 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 ERGIC1Q969X5 290 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 PGAM5Q96HS1 289 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 CMTM3Q96MX0 182 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 WDFY2Q96P53 400 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 SEPT5Q99719 369 aaPredicted RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 NTPCRQ9BSD7 190 aaKnown RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 SLC25A33Q9BSK2 321 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 C1QTNF5Q9BXJ0 243 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 GHITMQ9H3K2 345 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 PDZD7Q9H5P4 517 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 RANGRFQ9HD47 186 aaPredicted RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 GPR108Q9NPR9 543 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 HINT3Q9NQE9 182 aaKnown RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 CNOT8Q9UFF9 292 aaKnown RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 SWAP70Q9UH65 585 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 MYO6Q9UM54 1294 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 PCDHA7Q9UN72 937 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 INSL5Q9Y5Q6 135 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 MAU2Q9Y6X3 613 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 FRMD3A2A2Y4 597 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 A6NCN8 305 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 A8MZ25 164 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE7O76087 117 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 NKX2-2O95096 273 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE12FP0CL80 117 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE12GP0CL81 117 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE12IP0CL82 117 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 RARGP13631 454 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 TMEM11P17152 192 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 HOXA13P31271 388 aaPredicted RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 HOXD13P35453 343 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 PIGAP37287 484 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 POLGP54098 1239 aaPredicted RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 CEBPZQ03701 1054 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 CRYZQ08257 329 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE1Q13065 139 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 GAGE4Q13068 117 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 MEA1Q16626 185 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 JADE1Q6IE81 842 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 TYW3Q6IPR3 259 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 ANKRD54Q6NXT1 300 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 CACNA2D4Q7Z3S7 1137 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 HAPLN4Q86UW8 402 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 ZC3HC1Q86WB0 502 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 ADGRF2Q8IZF7 708 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 SPATA6LQ8N4H0 392 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 MAGEC3Q8TD91 643 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 FAM216AQ8WUB2 273 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 OIT3Q8WWZ8 545 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 NSUN4Q96CB9 384 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 C1orf74Q96LT6 269 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 SDF4Q9BRK5 362 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 NDST4Q9H3R1 872 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 ESRP2Q9H6T0 727 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 MRPL44Q9H9J2 332 aaKnown RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 LTB4R2Q9NPC1 389 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 UBA2Q9UBT2 640 aaPredicted RBP4.56□□□□□ -1.68
SQLE-202ENST00000518604 WNT16Q9UBV4 365 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 RCOR1Q9UKL0 485 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 SESN1Q9Y6P5 492 aa4.56□□□□□ -1.68
SQLE-202ENST00000518604 A0A0U1RQJ8 604 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 DYTNA2CJ06 578 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 PTGES3LE9PB15 166 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 J3KR12 359 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 K7ENM7 598 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 TIMM23O14925 209 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 JRKO75564 520 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 SERPINI2O75830 405 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 TSPAN9O75954 239 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 C21orf33P30042 268 aaPredicted RBP4.55□□□□□ -1.68
SQLE-202ENST00000518604 HOXC9P31274 260 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 STX2P32856 288 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 UBA7P41226 1012 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 EGR4Q05215 589 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 GRIK2Q13002 908 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 MMEL1Q495T6 779 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 SIGIRRQ6IA17 410 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 ZNF549Q6P9A3 640 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 PQLC2Q6ZP29 291 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 WDTC1Q8N5D0 677 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 C1orf131Q8NDD1 294 aaKnown RBP4.55□□□□□ -1.68
SQLE-202ENST00000518604 ASB5Q8WWX0 329 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 TXNDC15Q96J42 360 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 CCDC68Q9H2F9 335 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 SMARCAD1Q9H4L7 1026 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 HAUS2Q9NVX0 235 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 VPS28Q9UK41 221 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 CDC14AQ9UNH5 594 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 GPR34Q9UPC5 381 aa4.55□□□□□ -1.68
SQLE-202ENST00000518604 RSF1Q96T23 1441 aaPredicted RBP4.55□□□□□ -1.68
SQLE-202ENST00000518604 CPED1A4D0V7 1026 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms