RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PTSQ03393 145 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 PTK2BQ14289 1009 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 INPP5AQ14642 412 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 SUZ12Q15022 739 aaKnown RBP22■■□□□ 1.11
VEGFA-217ENST00000518538 CCDC70Q6NSX1 233 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 DBX2Q6ZNG2 339 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 PIP4P1Q86T03 277 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 SLC35F6Q8N357 371 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 FAM71DQ8N9W8 422 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 CCDC110Q8TBZ0 833 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 TMEM121Q9BTD3 319 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 LOC285095A0A1B0GVY8 99 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 GOLGA8CPA6NN73 597 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 USP27XA6NNY8 438 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 CEP104O60308 925 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 ANXA9O76027 345 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 FGGP02679 453 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 CSRP1P21291 193 aaKnown RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 CXCR5P32302 372 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 ETV3P41162 512 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 TNNT3P45378 269 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 STC1P52823 247 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 THOP1P52888 689 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 GEMP55040 296 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 FZD2Q14332 565 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 SIX1Q15475 284 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 OASLQ15646 514 aaKnown RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 CDKN3Q16667 212 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 ESRP1Q6NXG1 681 aaKnown RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 Q6ZVL8 140 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 TECPR1Q7Z6L1 1165 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 RAVER1Q8IY67 606 aaKnown RBP21.99■■□□□ 1.11
VEGFA-217ENST00000518538 PLA2G15Q8NCC3 412 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 MAIP1Q8WWC4 291 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 MRGPRX2Q96LB1 330 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 PPP1R2P1Q96PQ5 205 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 GORASP1Q9BQQ3 440 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 MAGEE1Q9HCI5 957 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 ZKSCAN5Q9Y2L8 839 aa21.99■■□□□ 1.11
VEGFA-217ENST00000518538 C1orf232A0A0U1RR37 186 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 FLRT2O43155 660 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 CLDN7O95471 211 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 C1SP09871 688 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 PSMB4P28070 264 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 EPHA8P29322 1005 aaPredicted RBP21.98■■□□□ 1.11
VEGFA-217ENST00000518538 GDF10P55107 478 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 PRPSAP1Q14558 356 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 TPRG1LQ5T0D9 272 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 PNCKQ6P2M8 343 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 DGLUCYQ7Z3D6 616 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 PARGQ86W56 976 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 NAXDQ8IW45 347 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 IPMKQ8NFU5 416 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 C1orf54Q8WWF1 131 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 RTP4Q96DX8 246 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 SRPK1Q96SB4 655 aaKnown RBP21.98■■□□□ 1.11
VEGFA-217ENST00000518538 APOOQ9BUR5 198 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 FSD1LQ9BXM9 530 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 SLC32A1Q9H598 525 aa21.98■■□□□ 1.11
VEGFA-217ENST00000518538 AAR2Q9Y312 384 aaKnown RBP21.98■■□□□ 1.11
VEGFA-217ENST00000518538 SH3BP5O60239 455 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 GCATO75600 419 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 ATXN1LP0C7T5 689 aaKnown RBP21.97■■□□□ 1.11
VEGFA-217ENST00000518538 STIP1P31948 543 aaKnown RBP21.97■■□□□ 1.11
VEGFA-217ENST00000518538 CCNG2Q16589 344 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 MACC1Q6ZN28 852 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 ARHGEF18Q6ZSZ5 1173 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 CCHCR1Q8TD31 782 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 SAP25Q8TEE9 199 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 PBKQ96KB5 322 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 OR1A2Q9Y585 309 aa21.97■■□□□ 1.11
VEGFA-217ENST00000518538 ASCC3Q8N3C0 2202 aaKnown RBP21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ATP1A1P05023 1023 aaKnown RBP21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ITGAVP06756 1048 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 TSHRP16473 764 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 HLA-DPA1P20036 260 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 TRIM23P36406 574 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 DPTQ07507 201 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 NFATC4Q14934 902 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 SLC1A5Q15758 541 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 LONRF2Q1L5Z9 754 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 PARP6Q2NL67 630 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 INAVAQ3KP66 663 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 SIRPB2Q5JXA9 342 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 DRICH1Q6PGQ1 229 aaPredicted RBP21.96■■□□□ 1.11
VEGFA-217ENST00000518538 RFLNAQ6ZTI6 216 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ZNF765Q7L2R6 523 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 LYSMD3Q7Z3D4 306 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 GATAD2AQ86YP4 633 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 NRSN1Q8IZ57 195 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 PELI3Q8N2H9 469 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 DEFB124Q8NES8 71 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ZFYVE1Q9HBF4 777 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 DNAJC28Q9NX36 388 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ZNF148Q9UQR1 794 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 ZNF711Q9Y462 761 aa21.96■■□□□ 1.11
VEGFA-217ENST00000518538 K7ESM1 405 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 KCNK5O95279 499 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 CSF2P04141 144 aa21.95■■□□□ 1.1
VEGFA-217ENST00000518538 HOXC4P09017 264 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms