RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 HEXIM1O94992 359 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ECEL1O95672 775 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PRLP01236 227 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HOXC4P09017 264 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GLB1P16278 677 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AMPD1P23109 780 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NSFP46459 744 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RPIAP49247 311 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NDST2P52849 883 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MAPK10P53779 464 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 GEMIN4P57678 1058 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 MAXP61244 160 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CTBSQ01459 385 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NR1D2Q14995 579 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 AMZ1Q400G9 498 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 EFHC2Q5JST6 749 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 BROXQ5VW32 411 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ESRP1Q6NXG1 681 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DNAJC24Q6P3W2 148 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TRIM72Q6ZMU5 477 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 RFX8Q6ZV50 586 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TIPARPQ7Z3E1 657 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TAF8Q7Z7C8 310 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZSCAN30Q86W11 494 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF354CQ86Y25 554 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 JAMLQ86YT9 394 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 FAM114A1Q8IWE2 563 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 BMPERQ8N8U9 685 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 PIH1D2Q8WWB5 315 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 CASKIN2Q8WXE0 1202 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SPOCK2Q92563 424 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SCAMP4Q969E2 229 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NKD1Q969G9 470 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 EID2BQ96D98 161 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ARHGEF26Q96DR7 871 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SGF29Q96ES7 293 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ZNF641Q96N77 438 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NAP1L5Q96NT1 182 aaPredicted RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 SELENOOQ9BVL4 669 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TEX101Q9BY14 249 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DHX35Q9H5Z1 703 aaKnown RBP8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 DTLQ9NZJ0 730 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 NCKIPSDQ9NZQ3 722 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TAAR2Q9P1P5 351 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 HPCAL4Q9UM19 191 aa8.28□□□□□ -1.08
SCARNA20.3-201ENST00000516913 TRBV23OR9-2A0A075B6M9 112 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PRSS38A1L453 326 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TMEM110-MUSTN1A8MSY1 372 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DFFAO00273 331 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 EEF2KO00418 725 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TOR1BO14657 336 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TNFRSF10CO14798 259 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 DUX1O43812 170 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 FZD6O60353 706 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MAFKO60675 156 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PALMO75781 387 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TNFP01375 233 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CALB1P05937 261 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CD48P09326 243 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ALPIP09923 528 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SKILP12757 684 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CTSEP14091 401 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CCNB1P14635 433 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CTPS1P17812 591 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 F8A1P23610 371 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ADCY8P40145 1251 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SCNN1BP51168 640 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 TPI1P60174 286 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NSUN2Q08J23 767 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ELP6Q0PNE2 266 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MMRN1Q13201 1228 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ATP13A4Q4VNC1 1196 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 BRAT1Q6PJG6 821 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CLEC17AQ6ZS10 378 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 HEATR4Q86WZ0 1026 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 GKN2Q86XP6 184 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 BTBD6Q96KE9 485 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PSKH2Q96QS6 385 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 MCCC1Q96RQ3 725 aaPredicted RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ABCG8Q9H221 673 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CLMPQ9H6B4 373 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CARS2Q9HA77 564 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 IL17BQ9UHF5 180 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CD84Q9UIB8 345 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 SUFUQ9UMX1 484 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 B3GALT1Q9Y5Z6 326 aa8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 OAS3Q9Y6K5 1087 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ZFC3H1O60293 1989 aaKnown RBP8.27□□□□□ -1.09
SCARNA20.3-201ENST00000516913 IGHV1OR21-1A0A087WYE8 117 aa8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 CFAP69A5D8W1 941 aa8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 FGF10O15520 208 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NKX2-8O15522 239 aa8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 ARHGAP6O43182 974 aa8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 NUDT21O43809 227 aaKnown RBP8.26□□□□□ -1.09
SCARNA20.3-201ENST00000516913 LIPCP11150 499 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms