RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 DOCK10Q96BY6 2186 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ARHGEF35A5YM69 484 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 A8MU76 341 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 DTNBO60941 627 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MED24O75448 989 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TSPAN12O95859 305 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CRYABP02511 175 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TRIM49P0CI25 452 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TRIM49CP0CI26 452 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MAPTP10636 758 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ABOP16442 354 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 FPR1P21462 350 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CD1CP29017 333 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ALDH4A1P30038 563 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 GCH1P30793 250 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 AKT2P31751 481 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PEX19P40855 299 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ME1P48163 572 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 POLD2P49005 469 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ZNF131P52739 623 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CDH15P55291 814 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 NPEPPSP55786 919 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 UBE2HP62256 183 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 VLDLRP98155 873 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MYL7Q01449 175 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 POU5F1Q01860 360 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 SLC20A2Q08357 652 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PMPCAQ10713 525 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 LRMPQ12912 555 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CTTNQ14247 550 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PIGHQ14442 188 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 EMC2Q15006 297 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 STK38Q15208 465 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CLPPQ16740 277 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM187BQ17R55 369 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC142Q17RM4 750 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 XKR9Q5GH70 373 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TPRG1LQ5T0D9 272 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TAF3Q5VWG9 929 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PLA2G4FQ68DD2 849 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CDCA2Q69YH5 1023 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 C1orf186Q6ZWK4 172 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 SV2BQ7L1I2 683 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 APBB1IPQ7Z5R6 666 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MMAAQ8IVH4 418 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PHACTR4Q8IZ21 702 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 D2HGDHQ8N465 521 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ZBTB2Q8N680 514 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 BANPQ8N9N5 519 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CLEC1AQ8NC01 280 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 GPR156Q8NFN8 814 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 KIF18AQ8NI77 898 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM174Q8WUU8 243 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 RND1Q92730 232 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CDK5RAP3Q96JB5 506 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 IFT74Q96LB3 600 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 BMFQ96LC9 184 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TBATAQ96M53 351 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CCDC43Q96MW1 224 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 GBP5Q96PP8 586 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 KCTD15Q96SI1 283 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TSPAN18Q96SJ8 248 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 FAM129BQ96TA1 746 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MTRQ99707 1265 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 YIPF4Q9BSR8 244 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 GRIP2Q9C0E4 1043 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 SLITRK2Q9H156 845 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TNKS2Q9H2K2 1166 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 BHMT2Q9H2M3 363 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 ST6GALNAC4Q9H4F1 302 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 TMEM134Q9H6X4 195 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 AKIRIN1Q9H9L7 192 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 KCND1Q9NSA2 647 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 DDX19AQ9NUU7 478 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 KBTBD4Q9NVX7 518 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 LARSQ9P2J5 1176 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 WRAP73Q9P2S5 460 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 LNPEPQ9UIQ6 1025 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 FARSAQ9Y285 508 aaKnown RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 MPDZO75970 2070 aa3.18□□□□□ -1.9
SCARNA13-201ENST00000516672 PVALEFA0A1B0GWK0 134 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 GOLGA6L4A6NEF3 574 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 ACKR2O00590 384 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SPINT1O43278 529 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 GREM1O60565 184 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SIN3BO75182 1162 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 SASH3O75995 380 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 NDUFA10O95299 355 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 MPIG6BO95866 241 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 KLKB1P03952 638 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 CYP1A1P04798 512 aaPredicted RBP3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 TPM3P06753 285 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 EPXP11678 715 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PLS3P13797 630 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 KCNE1P15382 129 aa3.17□□□□□ -1.9
SCARNA13-201ENST00000516672 PAX1P15863 534 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms