RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 EPN3Q9H201 632 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 TRIOBPQ9H2D6 2365 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CCDC134Q9H6E4 229 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SUDS3Q9H7L9 328 aaPredicted RBP7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 BRD9Q9H8M2 597 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MLXIPLQ9NP71 852 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 FBXO6Q9NRD1 293 aaPredicted RBP7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SNX15Q9NRS6 342 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 CATSPERZQ9NTU4 200 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 GTSE1Q9NYZ3 720 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 EPS15L1Q9UBC2 864 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 DCDC2Q9UHG0 476 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 SLC39A10Q9ULF5 831 aa7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 MTO1Q9Y2Z2 717 aaKnown RBP7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 USP15Q9Y4E8 981 aaPredicted RBP7.65□□□□□ -1.18
SCARNA20.1-201ENST00000516009 C1orf232A0A0U1RR37 186 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM95CA0A1B0GW59 222 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GMNCA6NCL1 334 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TBC1D3BA6NDS4 549 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 OR51F1A6NGY5 319 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 H7C0S8 307 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PFDN6O15212 129 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HAUS5O94927 633 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ASMTLO95671 621 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 APODP05090 189 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SAT1P21673 171 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NFKBIAP25963 317 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GABRB3P28472 473 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PMLP29590 882 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MC4RP32245 332 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HNF1BP35680 557 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HMGCLP35914 325 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MAGEA12P43365 314 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LEPRP48357 1165 aaKnown RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SLC12A2P55011 1212 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 WDR4P57081 412 aaKnown RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 HTR4Q13639 388 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PDE1CQ14123 709 aaPredicted RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 USP10Q14694 798 aaKnown RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PTPRRQ15256 657 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TAF1BQ53T94 588 aaPredicted RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ARSIQ5FYB1 569 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BRAT1Q6PJG6 821 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TPRG1Q6ZUI0 275 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CMC1Q7Z7K0 106 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZSWIM9Q86XI8 627 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SLC41A1Q8IVJ1 513 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PHTF2Q8N3S3 785 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ZNF366Q8N895 744 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GPATCH11Q8N954 259 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CKAP2Q8WWK9 683 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SUSD6Q92537 303 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VOPP1Q96AW1 172 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 SCRN2Q96FV2 425 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TSPAN17Q96FV3 270 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MAGEB18Q96M61 343 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TSNARE1Q96NA8 513 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KLHL32Q96NJ5 620 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FAM111AQ96PZ2 611 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C19orf43Q9BQ61 176 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 RPP25Q9BUL9 199 aaKnown RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VPS11Q9H270 941 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CAB39LQ9H9S4 337 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 BPIFA1Q9NP55 256 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 IL17CQ9P0M4 197 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 MARCH4Q9P2E8 410 aaPredicted RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 IL36AQ9UHA7 158 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FKBPLQ9UIM3 349 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TLK1Q9UKI8 766 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GRID1Q9ULK0 1009 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CORO1CQ9ULV4 474 aaPredicted RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 COLQQ9Y215 455 aaPredicted RBP7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PPIL1Q9Y3C6 166 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NUMBLQ9Y6R0 609 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 WASF2Q9Y6W5 498 aa7.64□□□□□ -1.19
SCARNA20.1-201ENST00000516009 A0A096LPK6 155 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 EDDM13A0A1B0GTR0 161 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TSPAN11A1L157 253 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NPIPB15A6NHN6 443 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ANHXE9PGG2 379 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 H3BQ06 376 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 ARNTLO00327 626 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 NDUFS3O75489 264 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 LEFTY1O75610 366 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 KAT7O95251 611 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CLDN7O95471 211 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 S1PR4O95977 384 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 PRNPP04156 253 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 C2P06681 752 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GSTA1P08263 222 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 VIMP08670 466 aaKnown RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CYP2A6P11509 494 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 STMN1P16949 149 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 XPAP23025 273 aaPredicted RBP7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 CRABP2P29373 138 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 FOXN2P32314 431 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 GRIA2P42262 883 aa7.63□□□□□ -1.19
SCARNA20.1-201ENST00000516009 TTPAP49638 278 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms