RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	NADK2	Q4G0N4	442 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	PRR30	Q53SZ7	412 aa	Predicted RBP	10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	C1QL3	Q5VWW1	255 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	CRYBG3	Q68DQ2	2970 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	TRNP1	Q6NT89	227 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	ZSWIM9	Q86XI8	627 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	ESX1	Q8N693	406 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	PRR7	Q8TB68	274 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	HCAR2	Q8TDS4	363 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	AHCYL2	Q96HN2	611 aa	Known RBP	10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	ZPBP	Q9BS86	351 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	KLC2	Q9H0B6	622 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	SUV39H2	Q9H5I1	410 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	LHX3	Q9UBR4	397 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	OR12D3	Q9UGF7	316 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	CROT	Q9UKG9	612 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	NEU3	Q9UQ49	428 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	MAP4K5	Q9Y4K4	846 aa		10.5	□□□□□ -0.73
CLDND1-231	ENST00000515620	MED13	Q9UHV7	2174 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FAM72C	H0Y354	149 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	GOLGA8S	H3BPF8	625 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PDE2A	O00408	941 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	KATNA1	O75449	491 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FUCA1	P04066	466 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	TRIM23	P36406	574 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	GPLD1	P80108	840 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ATP11A	P98196	1134 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	CTBS	Q01459	385 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PDAP1	Q13442	181 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	RAPGEF1	Q13905	1077 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	RAB6C	Q53S08	254 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FAM72A	Q5TYM5	149 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FAM72D	Q6L9T8	149 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PNCK	Q6P2M8	343 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	BRAT1	Q6PJG6	821 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	LIPI	Q6XZB0	460 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	BNIPL	Q7Z465	357 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ARHGAP22	Q7Z5H3	698 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PHLDB2	Q86SQ0	1253 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FAM72B	Q86X60	149 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	DNAAF5	Q86Y56	855 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	CAMK1D	Q8IU85	385 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	TRIM59	Q8IWR1	403 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	OR10G6	Q8NH81	332 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PDCD6IP	Q8WUM4	868 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PTCD2	Q8WV60	388 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	CASKIN2	Q8WXE0	1202 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	SHC3	Q92529	594 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	TCTN2	Q96GX1	697 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	CCDC34	Q96HJ3	373 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	CRACR2A	Q9BSW2	395 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ULBP3	Q9BZM4	244 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	RAB6C	Q9H0N0	254 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	FBXO8	Q9NRD0	319 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	TMEM51	Q9NW97	253 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	PDP2	Q9P2J9	529 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ERRFI1	Q9UJM3	462 aa	Predicted RBP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	SUFU	Q9UMX1	484 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ST14	Q9Y5Y6	855 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	ESPL1	Q14674	2120 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	POLQ	O75417	2590 aa		10.49	□□□□□ -0.73
CLDND1-231	ENST00000515620	HIVEP3	Q5T1R4	2406 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	OTOG	Q6ZRI0	2925 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	SHANK1	Q9Y566	2161 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	WIPF3	A6NGB9	483 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620		A8MX80	341 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	TCP11X1	B4DZS4	312 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	POLR1C	O15160	346 aa	Predicted RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	INPP4B	O15327	924 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	BUB1B	O60566	1050 aa	Predicted RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	SORBS2	O94875	1100 aa	Known RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	LRIG2	O94898	1065 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	LDLR	P01130	860 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	CEACAM5	P06731	702 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	GM2A	P17900	193 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	SCNN1A	P37088	669 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	ACTR1B	P42025	376 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	PGD	P52209	483 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	ACTR1A	P61163	376 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	KRT85	P78386	507 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	NRG1	Q02297	640 aa	Predicted RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	PTK2	Q05397	1052 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	STIM1	Q13586	685 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	MAP7	Q14244	749 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	GRM3	Q14832	879 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	ACOX1	Q15067	660 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	INO80D	Q53TQ3	878 aa	Predicted RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	C2CD6	Q53TS8	623 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	KLHL10	Q6JEL2	608 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	TRIM65	Q6PJ69	517 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	SLC47A2	Q86VL8	602 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	XYLT1	Q86Y38	959 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	PAF1	Q8N7H5	531 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	TBC1D31	Q96DN5	1066 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	ZNF641	Q96N77	438 aa	Predicted RBP	10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	GSDMA	Q96QA5	445 aa		10.48	□□□□□ -0.73
CLDND1-231	ENST00000515620	SLC38A3	Q99624	504 aa		10.48	□□□□□ -0.73

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