RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SATL1Q86VE3 508 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 KLHDC8BQ8IXV7 354 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 EXOC8Q8IYI6 725 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 LRRC8CQ8TDW0 803 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 NOC3LQ8WTT2 800 aaKnown RBP3.88□□□□□ -1.79
LINC01088-211ENST00000515597 TMEM19Q96HH6 336 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 SIN3AQ96ST3 1273 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 HAUS8Q9BT25 410 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 C1QTNF5Q9BXJ0 243 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 ESRP2Q9H6T0 727 aaKnown RBP3.88□□□□□ -1.79
LINC01088-211ENST00000515597 MKKSQ9NPJ1 570 aaPredicted RBP3.88□□□□□ -1.79
LINC01088-211ENST00000515597 TMEM160Q9NX00 188 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 HSF4Q9ULV5 492 aa3.88□□□□□ -1.79
LINC01088-211ENST00000515597 AQRO60306 1485 aaKnown RBP eCLIP3.87□□□□□ -1.796e-6■■■■□ 25.1
LINC01088-211ENST00000515597 BAZ1BQ9UIG0 1483 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CLASP1Q7Z460 1538 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 PLEKHD1A6NEE1 506 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 ERI2A8K979 691 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CRYAAP02489 173 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 URODP06132 367 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 GALTP07902 379 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 KCNA5P22460 613 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 POU1F1P28069 291 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 PGM1P36871 562 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 EFNA5P52803 228 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 RAD23BP54727 409 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CDH15P55291 814 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 PHEXP78562 749 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 MMEL1Q495T6 779 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 SGO1Q5FBB7 561 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 TMEM81Q6P7N7 255 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CCNI2Q6ZMN8 369 aaPredicted RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 TRMT1LQ7Z2T5 733 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 LRRTM4Q86VH4 590 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 SFR1Q86XK3 245 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 FOXRED2Q8IWF2 684 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CHERPQ8IWX8 916 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 BEST2Q8NFU1 509 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CTCFLQ8NI51 663 aaPredicted RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 MAGEC3Q8TD91 643 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 PPM1EQ8WY54 764 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 TTC14Q96N46 770 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 ZNF570Q96NI8 536 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 NUF2Q9BZD4 464 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 INTS2Q9H0H0 1204 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 LRRC4Q9HBW1 653 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 PCDH9Q9HC56 1237 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CTNNAL1Q9UBT7 734 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 HSPB7Q9UBY9 170 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 CNOT7Q9UIV1 285 aaKnown RBP3.87□□□□□ -1.79
LINC01088-211ENST00000515597 TINAGQ9UJW2 476 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 STON1Q9Y6Q2 735 aa3.87□□□□□ -1.79
LINC01088-211ENST00000515597 FANCD2Q9BXW9 1451 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 MT-CYBP00156 380 aaPredicted RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 APOHP02749 345 aaPredicted RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 VEPH1Q14D04 833 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 NFIL3Q16649 462 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 SYT16Q17RD7 645 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 TCTN1Q2MV58 587 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 ACCSLQ4AC99 568 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 NAA35Q5VZE5 725 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 TXNDC8Q6A555 127 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 WDR73Q6P4I2 378 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 CYP26C1Q6V0L0 522 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 LINGO2Q7L985 606 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 SLC35F3Q8IY50 421 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 USP13Q92995 863 aaPredicted RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 UBXN10Q96LJ8 280 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 KXD1Q9BQD3 176 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 TTYH1Q9H313 450 aaPredicted RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 CNGB3Q9NQW8 809 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 KLHL1Q9NR64 748 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 MCM9Q9NXL9 1143 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 SLC25A10Q9UBX3 287 aaPredicted RBP3.86□□□□□ -1.79
LINC01088-211ENST00000515597 MMP24Q9Y5R2 645 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 ADGRL1O94910 1474 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 CEP164Q9UPV0 1460 aa3.86□□□□□ -1.79
LINC01088-211ENST00000515597 FAM172BPA6NC97 362 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 P2RY10O00398 339 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 BCAT2O15382 392 aaPredicted RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 TACC1O75410 805 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 SLC22A3O75751 556 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 TBX6O95947 436 aaPredicted RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 DDX5P17844 614 aaKnown RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 MAPK9P45984 424 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 CLCN3P51790 818 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 FUT6P51993 359 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 ATP12AP54707 1039 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 HIST2H2ACQ16777 129 aaPredicted RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 TMEM95Q3KNT9 176 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 C14orf177Q52M58 125 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 KRBA2Q6ZNG9 492 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 DHX40Q8IX18 779 aaKnown RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 CIARTQ8N365 385 aaPredicted RBP3.85□□□□□ -1.79
LINC01088-211ENST00000515597 KCNH5Q8NCM2 988 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 ZCCHC10Q8TBK6 192 aa3.85□□□□□ -1.79
LINC01088-211ENST00000515597 BBS4Q96RK4 519 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms