RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 CYP2A6P11509 494 aaPredicted RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 CTSEP14091 401 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 FECHP22830 423 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 POLD2P49005 469 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 HK3P52790 923 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 HADHBP55084 474 aaKnown RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 PTSQ03393 145 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 TARDBPQ13148 414 aaKnown RBP eCLIP11.5□□□□□ -0.57
VCAN-212ENST00000515397 ARHGEF7Q14155 803 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 GALNT3Q14435 633 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 NFATC4Q14934 902 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 PDK1Q15118 436 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 SMAD1Q15797 465 aaKnown RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 PCSK7Q16549 785 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 HES3Q5TGS1 186 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 LRRC66Q68CR7 880 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 USP45Q70EL2 814 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 ZC3H18Q86VM9 953 aaKnown RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 TMEM139Q8IV31 216 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 CCL4L1Q8NHW4 92 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 SCAMP4Q969E2 229 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 NUS1Q96E22 293 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 OLFM3Q96PB7 478 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 AGAP2Q99490 1192 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 IL12RB2Q99665 862 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 BAG1Q99933 345 aaPredicted RBP11.5□□□□□ -0.57
VCAN-212ENST00000515397 FAM118BQ9BPY3 351 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 PCDH9Q9HC56 1237 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 CYP4F12Q9HCS2 524 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 FGF22Q9HCT0 170 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 NLGN3Q9NZ94 848 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 SPASTQ9UBP0 616 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 KLQ9UEF7 1012 aa11.5□□□□□ -0.57
VCAN-212ENST00000515397 hCG_1818297A0A087WSY0 165 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 A0A0A6YYK5 440 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 A0A0J9YYE9 177 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 CFAP69A5D8W1 941 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 CACNB4O00305 520 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 PSTPIP1O43586 416 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 RASGRP1O95267 797 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 MT-CYBP00156 380 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 TNFP01375 233 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 TRBC1P01850 177 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ANXA6P08133 673 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 C1SP09871 688 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ALPPL2P10696 532 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 CKMT1AP12532 417 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ZFXP17010 805 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 ACP1P24666 158 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 HTR1BP28222 390 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 PEX5P50542 639 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 IFI35P80217 286 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 INSM1Q01101 510 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 CYP4F3Q08477 520 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 MTM1Q13496 603 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 AGERQ15109 404 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 TAZQ16635 292 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 QPCTQ16769 361 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 RALGPS1Q5JS13 557 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ALG1LQ6GMV1 187 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 RAET1GQ6H3X3 334 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 GUSBP11Q6P575 273 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 DOK6Q6PKX4 331 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 TECPR1Q7Z6L1 1165 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 KIAA1328Q86T90 577 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 TRIM74Q86UV6 250 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 SLC35F3Q8IY50 421 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 RCOR2Q8IZ40 523 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 BTN2A2Q8WVV5 523 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ZCCHC14Q8WYQ9 949 aaKnown RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 DTD2Q96FN9 168 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 WDR92Q96MX6 357 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 MCCC1Q96RQ3 725 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 TDRD1Q9BXT4 1180 aaKnown RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 TMEM168Q9H0V1 697 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 ABCG8Q9H221 673 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
VCAN-212ENST00000515397 DOLKQ9UPQ8 538 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 TMEM98Q9Y2Y6 226 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 PPIL1Q9Y3C6 166 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 PCDHGA1Q9Y5H4 931 aa11.49□□□□□ -0.57
VCAN-212ENST00000515397 PTPRBP23467 1997 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 WDFY3Q8IZQ1 3526 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 ACACAQ13085 2346 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 ANKRD11Q6UB99 2663 aaPredicted RBP11.48□□□□□ -0.57
VCAN-212ENST00000515397 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 ZNF487B1APH4 448 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 PPP1R12AO14974 1030 aaPredicted RBP11.48□□□□□ -0.57
VCAN-212ENST00000515397 INPP4BO15327 924 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 PMPCBO75439 489 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 IPO7O95373 1038 aaKnown RBP11.48□□□□□ -0.57
VCAN-212ENST00000515397 SLC4A1P02730 911 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 PTPN3P26045 913 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 TRIM23P36406 574 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 WASHC5Q12768 1159 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 CAMK2BQ13554 666 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 TEX44Q53QW1 395 aa11.48□□□□□ -0.57
VCAN-212ENST00000515397 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms