RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 OSBPL11Q9BXB4 747 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MTMR12Q9C0I1 747 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 NXF2Q9GZY0 626 aaKnown RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GNPTGQ9UJJ9 305 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 DTNAQ9Y4J8 743 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 VWA8A3KMH1 1905 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GOLGA8IPA6NC78 632 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GOLGA8JA6NMD2 632 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GOLGA8RI6L899 631 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GRM6O15303 877 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 KRT38O76015 456 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 KRT1P04264 644 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PSMA3P25788 255 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ENTPD1P49961 510 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 BCAP31P51572 246 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 DNAJB13P59910 316 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MYL6P60660 151 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SOX4Q06945 474 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MPP3Q13368 585 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CYLC2Q14093 348 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC14Q49A88 953 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 C6orf52Q5T4I8 152 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 DARS2Q6PI48 645 aaKnown RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 C11orf74Q86VG3 221 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 C18orf25Q96B23 403 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PIWIL1Q96J94 861 aaKnown RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 LENG8Q96PV6 779 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GCNAQ96QF7 691 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 TRIM62Q9BVG3 475 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ELOVL4Q9GZR5 314 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 NACA2Q9H009 215 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 TNFRSF12AQ9NP84 129 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 FBXO8Q9NRD0 319 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 TMEM216Q9P0N5 145 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CHMP2BQ9UQN3 213 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF148Q9UQR1 794 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PRG3Q9Y2Y8 225 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PRKAB1Q9Y478 270 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 FADS3Q9Y5Q0 445 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MN1Q10571 1320 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 RGSL1A5PLK6 1076 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MEIS3P2A8K0S8 358 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SNAP91O60641 907 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MT-ND3P03897 115 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 FAM58BPP0C7Q3 252 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CD6P30203 668 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 MIPP30301 263 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GALK1P51570 392 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CAMK2BQ13554 666 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 KCNC3Q14003 757 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GRIN2CQ14957 1233 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GRAMD1BQ3KR37 738 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CTXN3Q4LDR2 81 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CYBRD1Q53TN4 286 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 INTS6LQ5JSJ4 861 aaKnown RBP7.44□□□□□ -1.22
CLIP1-205ENST00000514271 LILRA6Q6PI73 481 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 NPNTQ6UXI9 565 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 TFAP2DQ7Z6R9 452 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GALNT7Q86SF2 657 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CRYBG2Q8N1P7 616 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SCML4Q8N228 414 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF781Q8N8C0 355 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF461Q8TAF7 563 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 RDH11Q8TC12 318 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 NACC2Q96BF6 587 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CMTM5Q96DZ9 223 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SPATA17Q96L03 361 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 GUCD1Q96NT3 240 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SLC8A2Q9UPR5 921 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 PCDHB5Q9Y5E4 795 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 CENPFP49454 3210 aa7.44□□□□□ -1.22
CLIP1-205ENST00000514271 SOCS2O14508 198 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF197O14709 1029 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 SCAMP3O14828 347 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MED7O43513 233 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 KRT7P08729 469 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PIK3R1P27986 724 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 SLC7A1P30825 629 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MOGQ16653 247 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC153Q494R4 210 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 MMEL1Q495T6 779 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PPM1LQ5SGD2 360 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 HP1BP3Q5SSJ5 553 aaPredicted RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ARHGAP17Q68EM7 881 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ANKRD54Q6NXT1 300 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 AMIGO2Q86SJ2 522 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PJA1Q8NG27 643 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 STYXQ8WUJ0 223 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF566Q969W8 418 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CTRCQ99895 268 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 SLC4A5Q9BY07 1137 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 YTHDF1Q9BYJ9 559 aaKnown RBP7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PAK5Q9P286 719 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 PDE4DIPQ5VU43 2346 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 FAM170AA1A519 330 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CST8O60676 142 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 GLRA3O75311 464 aa7.43□□□□□ -1.22
CLIP1-205ENST00000514271 CILPO75339 1184 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms