RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ALDH6A1Q02252 535 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CAND1Q86VP6 1230 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PLD6Q8N2A8 252 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CARNMT1Q8N4J0 409 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 OR9I1Q8NGQ6 314 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CLHC1Q8NHS4 586 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TRMOQ9BU70 441 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SLIT2O94813 1529 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 C5P01031 1676 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TFECO14948 347 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 MLYCDO95822 493 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FTH1P02794 183 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SLC16A1P53985 500 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 NCF4Q15080 339 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CCNYL2Q5T2Q4 361 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 RPS27LQ71UM5 84 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 LUZP2Q86TE4 346 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PROSER1Q86XN7 944 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PROX1Q92786 737 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 C12orf43Q96C57 262 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SERPINB11Q96P15 392 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 LMCD1Q9NZU5 365 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 MAFBQ9Y5Q3 323 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 LAMA4Q16363 1823 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 A0A1W2PPW3 197 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CLDN25C9JDP6 229 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 H3BN98 237 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PIP5K1BO14986 540 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 GSTM1P09488 218 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 KRT20P35900 424 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 NNMTP40261 264 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 C1DQ13901 141 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SIGLEC10Q96LC7 697 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TMPRSS4Q9NRS4 437 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PLK2Q9NYY3 685 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 VPS28Q9UK41 221 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SAMHD1Q9Y3Z3 626 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TELO2Q9Y4R8 837 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ATRNL1Q5VV63 1379 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 NOBOXO60393 691 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 LRATO95237 230 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CNPP09543 421 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TPTEP56180 551 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 INO80DQ53TQ3 878 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 C9orf57Q5W0N0 161 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TRIQKQ629K1 86 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 RAP1GAP2Q684P5 730 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 OR52E8Q6IFG1 317 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ZNF549Q6P9A3 640 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SIX5Q8N196 739 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 STMN3Q9NZ72 180 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 MAGEL2Q9UJ55 1249 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 IKZF3Q9UKT9 509 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CCL15-CCL14A0A0B4J2E2 113 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FGF10O15520 208 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 MSI1O43347 362 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ALOX5P09917 674 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 YWHAQP27348 245 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PTPN9P43378 593 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 POLR2JP52435 117 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CCL15Q16663 113 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FAM187BQ17R55 369 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FAM9CQ8IZT9 166 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ZFP28Q8NHY6 868 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 HM13Q8TCT9 377 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FCRL2Q96LA5 508 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 OXCT2Q9BYC2 517 aaPredicted RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ATP13A1Q9HD20 1204 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CNTN6Q9UQ52 1028 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TOPAZ1Q8N9V7 1692 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 BOLA2-SMG1P6H3BVE0 249 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 TNFRSF21O75509 655 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 STT3AP46977 705 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ZBED5Q49AG3 693 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FGD3Q5JSP0 725 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 MFSD4BQ5TF39 518 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 CNSTQ6PJW8 725 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 PLPPR4Q7Z2D5 763 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 LGI2Q8N0V4 545 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 FAR1Q8WVX9 515 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 SELENOMQ8WWX9 145 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 ESAMQ96AP7 390 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 COLEC11Q9BWP8 271 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 NIFKQ9BYG3 293 aaKnown RBP7.76□□□□□ -1.17
CLCN3-209ENST00000513761 GIN1Q9NXP7 522 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 IPPQ9Y573 584 aa7.76□□□□□ -1.17
CLCN3-209ENST00000513761 NPEPPSL1A6NEC2 478 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FAM25AB3EWG3 89 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FAM25CB3EWG5 89 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 FAM25GB3EWG6 89 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MAGEB3O15480 346 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 ARIH2O95376 493 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 LMO2P25791 158 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 CDK9P50750 372 aaKnown RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 PGGT1BP53609 377 aa7.75□□□□□ -1.17
CLCN3-209ENST00000513761 TRIP4Q15650 581 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 MAP1SQ66K74 1059 aaPredicted RBP7.75□□□□□ -1.17
CLCN3-209ENST00000513761 NCBP2-AS2Q69YL0 99 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms