RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 PRR7Q8TB68 274 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 HCAR2Q8TDS4 363 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 AHCYL2Q96HN2 611 aaKnown RBP10.5□□□□□ -0.73
CLDND1-227ENST00000513452 ZPBPQ9BS86 351 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 KLC2Q9H0B6 622 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 SUV39H2Q9H5I1 410 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 LHX3Q9UBR4 397 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 OR12D3Q9UGF7 316 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 CROTQ9UKG9 612 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 NEU3Q9UQ49 428 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
CLDND1-227ENST00000513452 MED13Q9UHV7 2174 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FAM72CH0Y354 149 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 GOLGA8SH3BPF8 625 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PDE2AO00408 941 aaPredicted RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 KATNA1O75449 491 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FUCA1P04066 466 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 TRIM23P36406 574 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 GPLD1P80108 840 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ATP11AP98196 1134 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 CTBSQ01459 385 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 RAPGEF1Q13905 1077 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 RAB6CQ53S08 254 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FAM72AQ5TYM5 149 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FAM72DQ6L9T8 149 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PNCKQ6P2M8 343 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 BRAT1Q6PJG6 821 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 LIPIQ6XZB0 460 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 BNIPLQ7Z465 357 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ARHGAP22Q7Z5H3 698 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PHLDB2Q86SQ0 1253 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FAM72BQ86X60 149 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 DNAAF5Q86Y56 855 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 CAMK1DQ8IU85 385 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 TRIM59Q8IWR1 403 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 OR10G6Q8NH81 332 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PDCD6IPQ8WUM4 868 aaKnown RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PTCD2Q8WV60 388 aaKnown RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 CASKIN2Q8WXE0 1202 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 SHC3Q92529 594 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 TCTN2Q96GX1 697 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 CCDC34Q96HJ3 373 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 CRACR2AQ9BSW2 395 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ULBP3Q9BZM4 244 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 RAB6CQ9H0N0 254 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 FBXO8Q9NRD0 319 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 TMEM51Q9NW97 253 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 TRNAU1APQ9NX07 287 aaKnown RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 PDP2Q9P2J9 529 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 RCOR3Q9P2K3 495 aaPredicted RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ERRFI1Q9UJM3 462 aaPredicted RBP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 SUFUQ9UMX1 484 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ST14Q9Y5Y6 855 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 ESPL1Q14674 2120 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 POLQO75417 2590 aa10.49□□□□□ -0.73
CLDND1-227ENST00000513452 HIVEP3Q5T1R4 2406 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 OTOGQ6ZRI0 2925 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SHANK1Q9Y566 2161 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 WIPF3A6NGB9 483 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 A8MX80 341 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TCP11X1B4DZS4 312 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 POLR1CO15160 346 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 INPP4BO15327 924 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 BUB1BO60566 1050 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SORBS2O94875 1100 aaKnown RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 LRIG2O94898 1065 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 LDLRP01130 860 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 CEACAM5P06731 702 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 GM2AP17900 193 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SCNN1AP37088 669 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 ACTR1BP42025 376 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 PGDP52209 483 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 ACTR1AP61163 376 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 KRT85P78386 507 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 NRG1Q02297 640 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 PTK2Q05397 1052 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 STIM1Q13586 685 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 MAP7Q14244 749 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 GRM3Q14832 879 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 ACOX1Q15067 660 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 INO80DQ53TQ3 878 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 C2CD6Q53TS8 623 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 KLHL10Q6JEL2 608 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TRIM65Q6PJ69 517 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SLC47A2Q86VL8 602 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 XYLT1Q86Y38 959 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 PAF1Q8N7H5 531 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TBC1D31Q96DN5 1066 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 ZNF641Q96N77 438 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 GSDMAQ96QA5 445 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SLC38A3Q99624 504 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TRIM55Q9BYV6 548 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 FRMD8Q9BZ67 464 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 MAGEB5Q9BZ81 275 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 SCAND2PQ9GZW5 306 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 TWSG1Q9GZX9 223 aa10.48□□□□□ -0.73
CLDND1-227ENST00000513452 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 PHPT1Q9NRX4 125 aaPredicted RBP10.48□□□□□ -0.73
CLDND1-227ENST00000513452 DONSONQ9NYP3 566 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms