RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CSRP3P50461 194 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 SCNN1BP51168 640 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 B4GALNT1Q00973 533 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ILF3Q12906 894 aaKnown RBP eCLIP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 RALGDSQ12967 914 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ASIC2Q16515 512 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 BOLA3Q53S33 107 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 SPECC1LQ69YQ0 1117 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 CYP4V2Q6ZWL3 525 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ZNF438Q7Z4V0 828 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ZSWIM9Q86XI8 627 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 SLITRK4Q8IW52 837 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ARHGAP12Q8IWW6 846 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 Q8N9G6 341 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PLA2G15Q8NCC3 412 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PDXPQ96GD0 296 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 COQ10AQ96MF6 247 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ARHGAP9Q9BRR9 750 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 TEX101Q9BY14 249 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 TMEM168Q9H0V1 697 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 ZWILCHQ9H900 591 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 CYP4F12Q9HCS2 524 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 STARD5Q9NSY2 213 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PISDQ9UG56 409 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PHTF1Q9UMS5 762 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 PCDHGA3Q9Y5H0 932 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 HEMK1Q9Y5R4 338 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-216ENST00000512683 RNF215Q9Y6U7 377 aa12.59□□□□□ -0.39
VEGFA-216ENST00000512683 SYCE3A1L190 88 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PRSS38A1L453 326 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PMS2P1A4D2B8 440 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 B4GAT1O43505 415 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 SLC28A2O43868 658 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PYGLP06737 847 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 CYP2A6P11509 494 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-216ENST00000512683 SKILP12757 684 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PCK1P35558 622 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PBX1P40424 430 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 DPTQ07507 201 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 LBRQ14739 615 aaKnown RBP12.58□□□□□ -0.4
VEGFA-216ENST00000512683 ACOX1Q15067 660 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 CA9Q16790 459 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 EXD3Q8N9H8 876 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 NETO2Q8NC67 525 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 SCRN2Q96FV2 425 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 CELF6Q96J87 481 aaKnown RBP12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 CDH19Q9H159 772 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 PPIL1Q9Y3C6 166 aa12.58□□□□□ -0.4
VEGFA-216ENST00000512683 RHPN2P1A8MT19 583 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 CAPN5O15484 640 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-216ENST00000512683 HEXIM1O94992 359 aaKnown RBP12.57□□□□□ -0.4
VEGFA-216ENST00000512683 SERPINC1P01008 464 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 FGF1P05230 155 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 IVLP07476 585 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 MYBL1P10243 752 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 GM2AP17900 193 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 CR2P20023 1033 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 CES1P23141 567 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 VIPR1P32241 457 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 RGRP47804 291 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 FANCCQ00597 558 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 KLHL30Q0D2K2 578 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 LINC00303Q3SY05 128 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 CCDC112Q8NEF3 446 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 USP7Q93009 1102 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 TRIM11Q96F44 468 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 SCARF2Q96GP6 870 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-216ENST00000512683 TAAR9Q96RI9 348 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 NUDCD1Q96RS6 583 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 ISCUQ9H1K1 167 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 MRPL47Q9HD33 250 aaKnown RBP12.57□□□□□ -0.4
VEGFA-216ENST00000512683 B4GALT6Q9UBX8 382 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 SLC17A4Q9Y2C5 497 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 SCINQ9Y6U3 715 aa12.57□□□□□ -0.4
VEGFA-216ENST00000512683 PRAMEF33A0A0G2JMD5 474 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 B4DGG1 531 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 STMND1H3BQB6 276 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 H3BRJ5 948 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 DFFAO00273 331 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 CASC3O15234 703 aaKnown RBP12.56□□□□□ -0.4
VEGFA-216ENST00000512683 PRAMEF10O60809 474 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 CEACAM5P06731 702 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 HGFP14210 728 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 MIPP30301 263 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 ARL4AP40617 200 aa12.56□□□□□ -0.4
VEGFA-216ENST00000512683 LIMK2P53671 638 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms