RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 APMAPQ9HDC9 416 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 PLEKHM1Q9Y4G2 1056 aa19.04■□□□□ 0.64
HMGCS1-206ENST00000511774 A8MX80 341 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 CAPN5O15484 640 aaPredicted RBP19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 STAT1P42224 750 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 GPR3P46089 330 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NOMO3P69849 1222 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 DCAF12Q5T6F0 453 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NAA35Q5VZE5 725 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 PNCKQ6P2M8 343 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 BRAT1Q6PJG6 821 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 SLC30A9Q6PML9 568 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 ZNF761Q86XN6 746 aaPredicted RBP19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NRSN1Q8IZ57 195 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NLGN4XQ8N0W4 816 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 NLGN4YQ8NFZ3 816 aaPredicted RBP19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 STARD8Q92502 1023 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 ASPSCR1Q9BZE9 553 aa19.03■□□□□ 0.64
HMGCS1-206ENST00000511774 GTPBP10A4D1E9 387 aaKnown RBP19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 CFAP69A5D8W1 941 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 J3KR12 359 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 GNLYP22749 145 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 KELP23276 732 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 AFMIDQ63HM1 303 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 CAPRIN2Q6IMN6 1127 aaKnown RBP19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 C16orf46Q6P387 395 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 ATCAYQ86WG3 371 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 CREBRFQ8IUR6 639 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 CENPIQ92674 756 aaPredicted RBP19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 ZNF641Q96N77 438 aaPredicted RBP19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 FRMD8Q9BZ67 464 aaPredicted RBP19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 PDCL3Q9H2J4 239 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 PDP2Q9P2J9 529 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 SUFUQ9UMX1 484 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 KCNMB2Q9Y691 235 aa19.02■□□□□ 0.64
HMGCS1-206ENST00000511774 C2CD4BA6NLJ0 364 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 SEMA7AO75326 666 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 PDGFAP04085 211 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 MMEP08473 750 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 FURINP09958 794 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 ELFN1P0C7U0 828 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 MYCLP1P12525 358 aaPredicted RBP19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 GNPDA1P46926 289 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 POLD2P49005 469 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 CTBSQ01459 385 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 TMEM71Q6P5X7 295 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 DPPA4Q7L190 304 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 CCDC112Q8NEF3 446 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 ECHDC3Q96DC8 303 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 COQ10AQ96MF6 247 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 GSDMCQ9BYG8 508 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 UBA2Q9UBT2 640 aaPredicted RBP19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 ATP6V1DQ9Y5K8 247 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 FHOD1Q9Y613 1164 aa19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 ZNF106Q9H2Y7 1883 aaKnown RBP19.01■□□□□ 0.63
HMGCS1-206ENST00000511774 A8MU76 341 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 AGFG2O95081 481 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 MAP4P27816 1152 aaKnown RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 EPHB2P29323 1055 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 RAB15P59190 212 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 MC2RQ01718 297 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 ILF3Q12906 894 aaKnown RBP eCLIP19■□□□□ 0.63
HMGCS1-206ENST00000511774 TSR1Q2NL82 804 aaKnown RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 SNAP47Q5SQN1 464 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 HEATR4Q86WZ0 1026 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 ELOA2Q8IYF1 753 aaPredicted RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 TSEN2Q8NCE0 465 aaKnown RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 TEX101Q9BY14 249 aa19■□□□□ 0.63
HMGCS1-206ENST00000511774 TRNAU1APQ9NX07 287 aaKnown RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 TMEM184BQ9Y519 407 aaPredicted RBP19■□□□□ 0.63
HMGCS1-206ENST00000511774 A1L4Q6 167 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 STK17BO94768 372 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 LSM8O95777 96 aaKnown RBP18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 DLGAP3O95886 979 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 SDC4P31431 198 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 ADCY8P40145 1251 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 PTPN9P43378 593 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 YBEYP58557 167 aaPredicted RBP18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 BPIFB4P59827 614 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 ABHD18Q0P651 414 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 CFAP58Q5T655 872 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 SMYD5Q6GMV2 418 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 STRADAQ7RTN6 431 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 ARHGAP22Q7Z5H3 698 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 SRLQ86TD4 932 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 TMEM135Q86UB9 458 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 UMODL1-AS1Q8N2C9 162 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 FAM172AQ8WUF8 416 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 NTAN1Q96AB6 310 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 KIAA1143Q96AT1 154 aaPredicted RBP18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 TUBGCP5Q96RT8 1024 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 LRRC19Q9H756 370 aa18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
HMGCS1-206ENST00000511774 TRBV23OR9-2A0A075B6M9 112 aa18.98■□□□□ 0.63
HMGCS1-206ENST00000511774 TRAFD1O14545 582 aaPredicted RBP18.98■□□□□ 0.63
HMGCS1-206ENST00000511774 EML2O95834 649 aa18.98■□□□□ 0.63
HMGCS1-206ENST00000511774 TCN2P20062 427 aa18.98■□□□□ 0.63
HMGCS1-206ENST00000511774 COL8A1P27658 744 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms