RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 NR4A3Q92570 626 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 KAT5Q92993 513 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 CBWD1Q9BRT8 395 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 DBNDD1Q9H9R9 158 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 PITPNM1O00562 1244 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 CPSF4O95639 269 aaKnown RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 FGFR3P22607 806 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 IGFBP5P24593 272 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 MGAT1P26572 445 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 GMPSP49915 693 aaPredicted RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 PEX6Q13608 980 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 RABL3Q5HYI8 236 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 EFCAB12Q6NXP0 572 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 KDELC2Q7Z4H8 507 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 YAF2Q8IY57 180 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 SHC3Q92529 594 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 POPDC2Q9HBU9 364 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 PTGFRNQ9P2B2 879 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 TRIM3O75382 744 aaPredicted RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 FGF1P05230 155 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 TFEBP19484 476 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 LAPTM4BQ86VI4 370 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 NATD1Q8N6N6 113 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 TDRKHQ9Y2W6 561 aaKnown RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 MICAL2O94851 1124 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 DBTP11182 482 aaKnown RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 PLEKHG4Q58EX7 1191 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 PYHIN1Q6K0P9 492 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 GCNT7Q6ZNI0 430 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 OR6J1Q8NGC5 347 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 HHATLQ9HCP6 504 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ZNF214Q9UL59 606 aaPredicted RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 ZCCHC11Q5TAX3 1644 aaKnown RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 JCADQ9P266 1359 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 AGBL3Q8NEM8 1001 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 MOSPD1Q9UJG1 213 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 SALL3Q9BXA9 1300 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 RAB19A4D1S5 217 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ABRQ12979 859 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 PFKFB4Q16877 469 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 TAS1R2Q8TE23 839 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 APBA2Q99767 749 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 RBM22Q9NW64 420 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■■■■■ 30.3
HTT-208ENST00000510626 AP3D1O14617 1153 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A9O60656 530 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A6P19224 532 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A1P22309 533 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A4P22310 534 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A3P35503 534 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ITGA7Q13683 1181 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ZNF655Q8N720 491 aaPredicted RBP8.38□□□□□ -1.07
HTT-208ENST00000510626 WNT8BQ93098 351 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 ASB9Q96DX5 294 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A7Q9HAW7 530 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A10Q9HAW8 530 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 UGT1A8Q9HAW9 530 aa8.38□□□□□ -1.07
HTT-208ENST00000510626 SLC37A4O43826 429 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 GCATO75600 419 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 BMP7P18075 431 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 ALDH4A1P30038 563 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 AGTR1P30556 359 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 CYP1B1Q16678 543 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 FBXO47Q5MNV8 452 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 ARMC8Q8IUR7 673 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 HAVCR2Q8TDQ0 301 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NECTIN3Q9NQS3 549 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 C14orf105Q9NVL8 296 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 GULP1Q9UBP9 304 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NWD1Q149M9 1564 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 PPLO60437 1756 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 ZNF318Q5VUA4 2279 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 E7ENX8 843 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 CRATP43155 626 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 POU6F1Q14863 301 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
HTT-208ENST00000510626 ANKRD26P1Q6NSI1 321 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 ZYG11AQ6WRX3 759 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 C12orf4Q9NQ89 552 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 MTMR10Q9NXD2 777 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 LMO7Q8WWI1 1683 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 E2F8A0AVK6 867 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 TIFAQ96CG3 184 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 CCDC3Q9BQI4 270 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NMUR2Q9GZQ4 415 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NPAP1Q9NZP6 1156 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NR2E1Q9Y466 385 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 EVPLQ92817 2033 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 PRRG1O14668 218 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 PLOD3O60568 738 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NDUFS2O75306 463 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 NCCRP1Q6ZVX7 275 aaPredicted RBP8.37□□□□□ -1.07
HTT-208ENST00000510626 POLR1DQ9Y2S0 133 aa8.37□□□□□ -1.07
HTT-208ENST00000510626 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms