RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 STAG3L4Q8TBR4 150 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 ADAM33Q9BZ11 813 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 TTYH3Q9C0H2 523 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 GDF3Q9NR23 364 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 HCSTQ9UBK5 93 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 PRAMEF11O60813 436 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 AVILO75366 819 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 LTA4HP09960 611 aaKnown RBP5.14□□□□□ -1.59
PHF3-210ENST00000509876 CCNFP41002 786 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 MARCKSL1P49006 195 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 CCNHP51946 323 aaPredicted RBP5.14□□□□□ -1.59
PHF3-210ENST00000509876 ATP6V0D1P61421 351 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 VSNL1P62760 191 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 SLC29A2Q14542 456 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 FAM78AQ5JUQ0 283 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 EMC10Q5UCC4 262 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 KIAA1161Q6NSJ0 714 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 NETO2Q8NC67 525 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 LMX1AQ8TE12 382 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 HDAC10Q969S8 669 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 RMDN2Q96LZ7 410 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 STRADBQ9C0K7 418 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 CARS2Q9HA77 564 aaKnown RBP5.14□□□□□ -1.59
PHF3-210ENST00000509876 SIRPGQ9P1W8 387 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 PCDHB11Q9Y5F2 797 aa5.14□□□□□ -1.59
PHF3-210ENST00000509876 LCHNA4D1U4 455 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 SNAP91O60641 907 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 BEST1O76090 585 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ESRRAP11474 423 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 TNFRSF4P43489 277 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 RPL21P46778 160 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 KCNK10P57789 538 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ZNF33AQ06730 810 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CA9Q16790 459 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ZNF805Q5CZA5 627 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 FNBP1LQ5T0N5 605 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CCSAPQ6IQ19 270 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 FAM47EQ6ZV65 393 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ADAMTSL2Q86TH1 951 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 SLC9B2Q86UD5 537 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 LRRTM3Q86VH5 581 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ACOX2Q99424 681 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 GPR174Q9BXC1 333 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 NDEL1Q9GZM8 345 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ILKAPQ9H0C8 392 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 CAPN10Q9HC96 672 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 MIEF1Q9NQG6 463 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 EIF2B3Q9NR50 452 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 NCKIPSDQ9NZQ3 722 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 AJAP1Q9UKB5 411 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 CPED1A4D0V7 1026 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 F8W810 466 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CHUKO15111 745 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 AXIN1O15169 862 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 NOL3O60936 208 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 EIF2S1P05198 315 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 CMPK1P30085 196 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 MAGEA9P43362 315 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 USP46P62068 366 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ELAVL3Q14576 367 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 SNX30Q5VWJ9 437 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 HTR3DQ70Z44 454 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 MILR1Q7Z6M3 343 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ZNF567Q8N184 647 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 C3orf58Q8NDZ4 430 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 BTN2A2Q8WVV5 523 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 INPP5DQ92835 1189 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 DNASE1L2Q92874 299 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ELSPBP1Q96BH3 223 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 SORCS3Q9UPU3 1222 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 DDX3YO15523 660 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 RNGTTO60942 597 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 ZSCAN5DPP0CG00 497 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CHI3L1P36222 383 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 ACVRL1P37023 503 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ADAM17P78536 824 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 MRPS21P82921 87 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 CHI3L2Q15782 390 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 CHST15Q7LFX5 561 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 FIBINQ8TAL6 211 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 LRRN4Q8WUT4 740 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 STARD8Q92502 1023 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 KLF6Q99612 283 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 EBNA1BP2Q99848 306 aaKnown RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 FEM1AQ9BSK4 669 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 VIPAS39Q9H9C1 493 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 MLXIPLQ9NP71 852 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 POLR3BQ9NW08 1133 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 ATAD5Q96QE3 1844 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 TMEM114B3SHH9 223 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 B4DGG1 531 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 PRMT5O14744 637 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 ECI2O75521 394 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ARHGDIAP52565 204 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 NCALDP61601 193 aa5.13□□□□□ -1.59
PHF3-210ENST00000509876 ACTN3Q08043 901 aaPredicted RBP5.13□□□□□ -1.59
PHF3-210ENST00000509876 SERINC3Q13530 473 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms