RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ANKRD66B4E2M5 251 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 LEFTY2O00292 366 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 GLUD1P00367 558 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 LMAN2Q12907 356 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 MTA1Q13330 715 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 TUBB3Q13509 450 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 FAM83EQ2M2I3 478 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 MRNIPQ6NTE8 343 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 KIAA0408Q6ZU52 694 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 PIANPQ8IYJ0 282 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 FAM13CQ8NE31 585 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 ARMC5Q96C12 935 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 CCDC97Q96F63 343 aaPredicted RBP14.9□□□□□ -0.02
PHF3-209ENST00000509330 CLPTM1LQ96KA5 538 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 CDH19Q9H159 772 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 TAS2R1Q9NYW7 299 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 HCFC2Q9Y5Z7 792 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 SLC4A7Q9Y6M7 1214 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 DCXO43602 365 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 ATP5HO75947 161 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 ARHGEF15O94989 841 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 CRTAMO95727 393 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 TNK2Q07912 1038 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 Q6ZNB5 142 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 ELMOD1Q8N336 334 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 PHTF2Q8N3S3 785 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 AGAP11Q8TF27 550 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
PHF3-209ENST00000509330 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.9□□□□□ -0.02
PHF3-209ENST00000509330 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.9□□□□□ -0.02
PHF3-209ENST00000509330 ZNF195O14628 629 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TRIM24O15164 1050 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 ENTPD5O75356 428 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 WEE1P30291 646 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 MC4RP32245 332 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 PPP3CCP48454 512 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 RASSF2P50749 326 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TEAD2Q15562 447 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 SPDYAQ5MJ70 313 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 PPM1LQ5SGD2 360 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TMEM198Q66K66 360 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TRIM67Q6ZTA4 783 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TAS2R42Q7RTR8 314 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 C7orf61Q8IZ16 206 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 SHKBP1Q8TBC3 707 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 MCUR1Q96AQ8 359 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 ILKAPQ9H0C8 392 aaPredicted RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 SAR1AQ9NR31 198 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 ABCB8Q9NUT2 735 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 GALPQ9UBC7 116 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TRAV19A0A0A6YYK7 116 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 LRRC14BA6NHZ5 514 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 C2orf81A6NN90 581 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 IQCF5A8MTL0 148 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 TARM1B6A8C7 271 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 LTA4HP09960 611 aaKnown RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 ZNF140P52738 457 aaPredicted RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 ALG1LQ6GMV1 187 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 OR6Y1Q8NGX8 325 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 LRRC3Q9BY71 257 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 ABCG8Q9H221 673 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 INSL6Q9Y581 213 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 LTBP2Q14767 1821 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 PTPRSQ13332 1948 aa14.89□□□□□ -0.03
PHF3-209ENST00000509330 SPTBN5Q9NRC6 3674 aaKnown RBP14.89□□□□□ -0.03
PHF3-209ENST00000509330 A0A087X1B8 175 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NCF1BA6NI72 391 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 NCF1CA8MVU1 366 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 GRXCR1A8MXD5 290 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 STX7O15400 261 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 CCDC22O60826 627 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 EFCAB14O75071 495 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 RHOBTB1O94844 696 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 EPOP01588 193 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NCF1P14598 390 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 CALB2P22676 271 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 CDH13P55290 713 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 PDAP1Q13442 181 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 TECRLQ5HYJ1 363 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SH2D4BQ5SQS7 431 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 LYSMD3Q7Z3D4 306 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 LSMEM2Q8N112 164 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NAT16Q8N8M0 369 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 RBM15BQ8NDT2 890 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 GABPB2Q8TAK5 448 aaPredicted RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 PTERQ96BW5 349 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 BTBD10Q9BSF8 475 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 TNFRSF12AQ9NP84 129 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NCKIPSDQ9NZQ3 722 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 OR51B4Q9Y5P0 310 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 A8MT66 165 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NEDD8-MDP1E9PL57 170 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 NDUFS3O75489 264 aa14.88□□□□□ -0.03
PHF3-209ENST00000509330 SRP72O76094 671 aaKnown RBP14.88□□□□□ -0.03
PHF3-209ENST00000509330 BAIAP3O94812 1187 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms