RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 E7ENQ6 273 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 K7EQS6 105 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 M0QYV0 167 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 O00370 1275 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 FOXN3O00409 490 aaPredicted RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 PMM2O15305 246 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TSPAN3O60637 253 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 LETM1O95202 739 aaPredicted RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 OLFM2O95897 454 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ZBED1O96006 694 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TRIM21P19474 475 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 TBXAS1P24557 533 aaPredicted RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 OPRD1P41143 372 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 NBL1P41271 181 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 RPS9P46781 194 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 PDE6CP51160 858 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ZNF132P52740 706 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 YWHAGP61981 247 aaKnown RBP eCLIP4.72□□□□□ -1.65
NUP54-206ENST00000508465 YWHAEP62258 255 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 KDSRQ06136 332 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ADIGQ0VDE8 80 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 KCNJ12Q14500 433 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TAF5Q15542 800 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 CNGA2Q16280 664 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 EXOC3L4Q17RC7 722 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ANO4Q32M45 955 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SPDYE7PQ495Y7 208 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 FNDC3BQ53EP0 1204 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 BSPRYQ5W0U4 402 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ARHGAP17Q68EM7 881 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 PMF1Q6P1K2 205 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 FOXR2Q6PJQ5 311 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 LCLAT1Q6UWP7 414 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 GBP6Q6ZN66 633 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TPGS1Q6ZTW0 290 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 C11orf57Q6ZUT1 292 aaPredicted RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 ESPNLQ6ZVH7 1005 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 RSRC2Q7L4I2 434 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 CCDC186Q7Z3E2 898 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SYT12Q8IV01 421 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 PASD1Q8IV76 773 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SRRM1Q8IYB3 904 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 SPEM1Q8N4L4 309 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TTC39CQ8N584 583 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SLC35F5Q8WV83 523 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 GAB3Q8WWW8 586 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ZNF606Q8WXB4 792 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ASB10Q8WXI3 467 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 OVCA2Q8WZ82 227 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TFAP2CQ92754 450 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SECISBP2LQ93073 1101 aaKnown RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 P2RY11Q96G91 374 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 FAXDC2Q96IV6 333 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 TUBGCP2Q9BSJ2 902 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 UBXN6Q9BZV1 441 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 THAP9Q9H5L6 903 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 KIF9Q9HAQ2 790 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 LRRC4Q9HBW1 653 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SIX2Q9NPC8 291 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
NUP54-206ENST00000508465 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.72□□□□□ -1.65
NUP54-206ENST00000508465 TAB2Q9NYJ8 693 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 PLK2Q9NYY3 685 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 HESX1Q9UBX0 185 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 RASAL2Q9UJF2 1139 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ZKSCAN5Q9Y2L8 839 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 NFE2L3Q9Y4A8 694 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 ARHGEF17Q96PE2 2063 aaPredicted RBP4.72□□□□□ -1.65
NUP54-206ENST00000508465 ANAPC1Q9H1A4 1944 aa4.72□□□□□ -1.65
NUP54-206ENST00000508465 MYOFQ9NZM1 2061 aa4.71□□□□□ -1.65
NUP54-206ENST00000508465 MYH10P35580 1976 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 KIF26AQ9ULI4 1882 aaPredicted RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 GOLGA6L7A0A1B0GV03 622 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 TBC1D3BA6NDS4 549 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 PRR23AA6NEV1 266 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 BECN2A8MW95 431 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 K7ESF4 209 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 CBX4O00257 560 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 SLC9A3R1O14745 358 aaPredicted RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 XPO1O14980 1071 aaKnown RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 P4HA2O15460 535 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 MSI1O43347 362 aaKnown RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 THAP12O43422 761 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 SEC24DO94855 1032 aaPredicted RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 NFATC1O95644 943 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 PAEPP09466 180 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 RALAP11233 206 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 TDGF1P13385 188 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 DRD1P21728 446 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 CORO1AP31146 461 aaKnown RBP4.71□□□□□ -1.66
NUP54-206ENST00000508465 WASP42768 502 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 KLK7P49862 253 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 BCAT1P54687 386 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 MFAP3P55082 362 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 SLC8A3P57103 927 aa4.71□□□□□ -1.66
NUP54-206ENST00000508465 BST2Q10589 180 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms