RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 LILRB1Q8NHL6 650 aaPredicted RBP5.18□□□□□ -1.58
GYPA-205ENST00000508337 EVI5LQ96CN4 794 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 NR1H4Q96RI1 486 aaPredicted RBP5.18□□□□□ -1.58
GYPA-205ENST00000508337 CTAGE1Q96RT6 745 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 CSF3RQ99062 836 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 C1QTNF4Q9BXJ3 329 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 ZHX3Q9H4I2 956 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 HINT3Q9NQE9 182 aaKnown RBP5.18□□□□□ -1.58
GYPA-205ENST00000508337 ASAH2Q9NR71 780 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 TERF2IPQ9NYB0 399 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 ZNF224Q9NZL3 707 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 DLGAP2Q9P1A6 1054 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 LIMA1Q9UHB6 759 aaKnown RBP5.18□□□□□ -1.58
GYPA-205ENST00000508337 SIX4Q9UIU6 781 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 NAALADL1Q9UQQ1 740 aa5.18□□□□□ -1.58
GYPA-205ENST00000508337 EME2A4GXA9 379 aaPredicted RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 MBD4O95243 580 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 CYC1P08574 325 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 IL7RP16871 459 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 GNL1P36915 607 aaPredicted RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 IL15P40933 162 aaPredicted RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 METAP2P50579 478 aaKnown RBP eCLIP5.17□□□□□ -1.58
GYPA-205ENST00000508337 OLR1P78380 273 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 KIF5AQ12840 1032 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 COASYQ13057 564 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 FGFBP1Q14512 234 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 TSTQ16762 297 aaKnown RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 EIF2S3LQ2VIR3 472 aaKnown RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 IRAK1BP1Q5VVH5 260 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 C16orf82Q7Z2V1 217 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 NR2C2APQ86WQ0 139 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 TMTC2Q8N394 836 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 INTS12Q96CB8 462 aaKnown RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 BICD1Q96G01 975 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 FAM84BQ96KN1 310 aaPredicted RBP5.17□□□□□ -1.58
GYPA-205ENST00000508337 PKNOX2Q96KN3 472 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 SH3GL2Q99962 352 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 PCGF1Q9BSM1 259 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 PPP1R3EQ9H7J1 279 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 BRF2Q9HAW0 419 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 PLSCR4Q9NRQ2 329 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 KRT84Q9NSB2 600 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 SMC4Q9NTJ3 1288 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 SMARCAL1Q9NZC9 954 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 MAU2Q9Y6X3 613 aa5.17□□□□□ -1.58
GYPA-205ENST00000508337 HMGB1P1B2RPK0 211 aaPredicted RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 PRSS44E7EML9 344 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 SLC16A5O15375 505 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 PLRG1O43660 514 aaKnown RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 SH3BP5O60239 455 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 NDUFS7O75251 213 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 KDM4BO94953 1096 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 IPO7O95373 1038 aaKnown RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 ZNF12P17014 697 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 ZNF182P17025 639 aaPredicted RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 NFKBIAP25963 317 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 BSGP35613 385 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 CLCNKAP51800 687 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 FOXM1Q08050 763 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 TBCEQ15813 527 aaPredicted RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 KLHL22Q53GT1 634 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 SGO1Q5FBB7 561 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 SIGIRRQ6IA17 410 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 DSTYKQ6XUX3 929 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 QSOX2Q6ZRP7 698 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 MTSS1LQ765P7 747 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 DCP1BQ8IZD4 617 aaKnown RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 PDILTQ8N807 584 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 FRMD1Q8N878 549 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 NEK9Q8TD19 979 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 TMEM19Q96HH6 336 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 LMLNQ96KR4 655 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 TMEM68Q96MH6 324 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 EPYCQ99645 322 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 FAM110AQ9BQ89 295 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 TKTL2Q9H0I9 626 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 PLEKHA4Q9H4M7 779 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 MKKSQ9NPJ1 570 aaPredicted RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 RRP7BPQ9NSQ0 103 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 DIAPH3Q9NSV4 1193 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 OLA1Q9NTK5 396 aaKnown RBP5.16□□□□□ -1.58
GYPA-205ENST00000508337 ICAM5Q9UMF0 924 aa5.16□□□□□ -1.58
GYPA-205ENST00000508337 SMTNL1A8MU46 457 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 VCYO14598 125 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 NKX2-2O95096 273 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 TBX18O95935 607 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 AFPP02771 609 aaKnown RBP5.15□□□□□ -1.59
GYPA-205ENST00000508337 CHMP24386 653 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 ARL3P36405 182 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 PIP4K2AP48426 406 aaPredicted RBP5.15□□□□□ -1.59
GYPA-205ENST00000508337 NLRP5P59047 1200 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 POU3F1Q03052 451 aaPredicted RBP5.15□□□□□ -1.59
GYPA-205ENST00000508337 TMEM115Q12893 351 aaPredicted RBP5.15□□□□□ -1.59
GYPA-205ENST00000508337 DLG1Q12959 904 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 OASLQ15646 514 aaKnown RBP5.15□□□□□ -1.59
GYPA-205ENST00000508337 EFNB3Q15768 340 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 PAPPA-AS1Q5QFB9 102 aa5.15□□□□□ -1.59
GYPA-205ENST00000508337 FAM69BQ5VUD6 431 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms