RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 WDR45BQ5MNZ6 344 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 SLC22A25Q6T423 547 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 GDPD4Q6W3E5 623 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 TUBA1AQ71U36 451 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 PGBD5Q8N414 524 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 SETD9Q8NE22 299 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 RNFT2Q96EX2 444 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 TUBA1CQ9BQE3 449 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 AGXT2Q9BYV1 514 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 TMEM51Q9NW97 253 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 ALKBH4Q9NXW9 302 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 GDAQ9Y2T3 454 aa4.31□□□□□ -1.72
TRAPPC13-209ENST00000508304 TYW5A2RUC4 315 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 FAM172BPA6NC97 362 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 C17orf100A8MU93 164 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 EDIL3O43854 480 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 TFPIP10646 304 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 PTPN9P43378 593 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 ARSFP54793 590 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 PHEXP78562 749 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 ADORA2A-AS1P86434 159 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 FAM27E3Q08E93 113 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 TBL3Q12788 808 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 MAMLD1Q13495 774 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 TDGQ13569 410 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 CAPSQ13938 189 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 LPIN1Q14693 890 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 RPE65Q16518 533 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 BAK1Q16611 211 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 CCDC96Q2M329 555 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 FAM205BPQ63HN1 556 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 C16orf54Q6UWD8 224 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 IL20RBQ6UXL0 311 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 UNQ6126/PRO20091Q6UXV3 157 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 BRINP3Q76B58 766 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 TRMT1LQ7Z2T5 733 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 DENND6AQ8IWF6 608 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 MCPH1Q8NEM0 835 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 RFWD2Q8NHY2 731 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 MTBPQ96DY7 904 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 KIF1BPQ96EK5 621 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 CENPOQ9BU64 300 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 LMAN2LQ9H0V9 348 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 CLK4Q9HAZ1 481 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 DIAPH3Q9NSV4 1193 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 HSF4Q9ULV5 492 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 PCDHAC2Q9Y5I4 1007 aa4.3□□□□□ -1.72
TRAPPC13-209ENST00000508304 TDRD9Q8NDG6 1382 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 MTA2O94776 668 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 TMEM63AO94886 807 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 STARD3NLO95772 234 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CH25HO95992 272 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 ACADMP11310 421 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CTPS1P17812 591 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 DCTDP32321 178 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 KRT2P35908 639 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 GGT5P36269 586 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CENPAP49450 140 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 HDAC4P56524 1084 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CYP4A11Q02928 519 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CALD1Q05682 793 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CAMK1Q14012 370 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 EIF4A2Q14240 407 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 MEA1Q16626 185 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 EDRF1Q3B7T1 1238 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 TMTC3Q6ZXV5 915 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 MB21D2Q8IYB1 491 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 DIS3L2Q8IYB7 885 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 NGEFQ8N5V2 710 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 GPATCH11Q8N954 259 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 KCNG4Q8TDN1 519 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 TRIB2Q92519 343 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 RSRC1Q96IZ7 334 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 ZNF385AQ96PM9 386 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 CD180Q99467 661 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 MSTO1Q9BUK6 570 aa4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 NOL7Q9UMY1 257 aaKnown RBP4.29□□□□□ -1.72
TRAPPC13-209ENST00000508304 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 SYNDIG1LA6NDD5 238 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 PABPN1LA6NDY0 278 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSPY2A6NKD2 308 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 P2RY10O00398 339 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TNPO2O14787 897 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 DHX16O60231 1041 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 DOK2O60496 412 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSPAN9O75954 239 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 VNN2O95498 520 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 ADAP00813 363 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 CHRM4P08173 479 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms