RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 GPR63Q9BZJ6 419 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 TRABDQ9H4I3 376 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 ZFYVE1Q9HBF4 777 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 MRM3Q9HC36 420 aaKnown RBP14.2□□□□□ -0.14
RNF4-208ENST00000507247 PRMT8Q9NR22 394 aaPredicted RBP14.2□□□□□ -0.14
RNF4-208ENST00000507247 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 CYP8B1Q9UNU6 501 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 NCKAP1Q9Y2A7 1128 aa14.2□□□□□ -0.14
RNF4-208ENST00000507247 UQCRHLA0A096LP55 91 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 FAM237BA0A1B0GVD1 139 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 SLC7A4O43246 635 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 CRTAMO95727 393 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 TUBBP07437 444 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 UQCRHP07919 91 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 TDGF1P13385 188 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 ZNF30P17039 623 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 LPOP22079 712 aaPredicted RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 NFKBIAP25963 317 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 ACSL1P33121 698 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 ZNF140P52738 457 aaPredicted RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 STC1P52823 247 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 PTSQ03393 145 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 CCDC15Q0P6D6 951 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 ARHGEF7Q14155 803 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 TSSK4Q6SA08 328 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 RFLNAQ6ZTI6 216 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 HSD11B1LQ7Z5J1 315 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 RELL1Q8IUW5 271 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 MAML2Q8IZL2 1156 aaPredicted RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 CBARPQ8N350 705 aaPredicted RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 FRMD1Q8N878 549 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 OR4K2Q8NGD2 314 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 PYROXD1Q8WU10 500 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 RLN3Q8WXF3 142 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 MFSD3Q96ES6 412 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 CFAP36Q96G28 342 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 DNAJC1Q96KC8 554 aaKnown RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 FCRL3Q96P31 734 aaPredicted RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 TSPYL1Q9H0U9 437 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 CDC42EP4Q9H3Q1 356 aaKnown RBP14.19□□□□□ -0.14
RNF4-208ENST00000507247 BPIFA1Q9NP55 256 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 TREX1Q9NSU2 369 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 IL17CQ9P0M4 197 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 SAMD15Q9P1V8 674 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 COQ6Q9Y2Z9 468 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 CEP192Q8TEP8 1941 aa14.19□□□□□ -0.14
RNF4-208ENST00000507247 PLXNB3Q9ULL4 1909 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 H0Y858 1186 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 CCL22O00626 93 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 NEMP1O14524 444 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 TSPAN6O43657 245 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 MMP20O60882 483 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ELFN1P0C7U0 828 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 PGAM1P18669 254 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 HMGCLP35914 325 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 LIG3P49916 1009 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ARSDP51689 593 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 TMPRSS15P98073 1019 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 ANKRD20A4Q4UJ75 823 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 STEAP4Q687X5 459 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ESRP1Q6NXG1 681 aaKnown RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 UNC5AQ6ZN44 842 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 CEP128Q6ZU80 1094 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 TMEM135Q86UB9 458 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 C1orf210Q8IVY1 113 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 FAM160A2Q8N612 972 aaPredicted RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 DTWD2Q8NBA8 298 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 OR13J1Q8NGT2 312 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 STYXQ8WUJ0 223 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ZNF669Q96BR6 464 aaPredicted RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 SEMA4AQ9H3S1 761 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 NLE1Q9NVX2 485 aaPredicted RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 NINJ2Q9NZG7 142 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ZC3H7BQ9UGR2 993 aaKnown RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 RIMKLBQ9ULI2 386 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 ZFR2Q9UPR6 939 aaKnown RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.18□□□□□ -0.14
RNF4-208ENST00000507247 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
RNF4-208ENST00000507247 IGHV1OR15-9A0A0B4J2B8 117 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 ZCWPW2A0A1B0GU75 182 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 PRR23AA6NEV1 266 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 GOLGA8CPA6NN73 597 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 PSMD11O00231 422 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 AXIN1O15169 862 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 STX7O15400 261 aaKnown RBP14.17□□□□□ -0.14
RNF4-208ENST00000507247 LAMTOR5O43504 91 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 USP1O94782 785 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 PCDH8O95206 1070 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 C6P13671 934 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 BPIP17213 487 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 PSMA3P25788 255 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 SSTR1P30872 391 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 HOXA6P31267 233 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 GPX6P59796 221 aa14.17□□□□□ -0.14
RNF4-208ENST00000507247 PPP2CBP62714 309 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms