RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 TAF1BQ53T94 588 aaPredicted RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 ZNF805Q5CZA5 627 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 MANEALQ5VSG8 457 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 KIAA1161Q6NSJ0 714 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 RETSATQ6NUM9 610 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 B3GNT8Q7Z7M8 397 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 TTC7BQ86TV6 843 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 PARGQ86W56 976 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 ZDHHC17Q8IUH5 632 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 PCDH20Q8N6Y1 951 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 KCNE4Q8WWG9 221 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 PPP1R16AQ96I34 528 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 EXOC2Q96KP1 924 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 FAM81BQ96LP2 452 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 NSMCE3Q96MG7 304 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 ZNF578Q96N58 590 aaPredicted RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 DEPDC7Q96QD5 511 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 CCDC3Q9BQI4 270 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 WRAP53Q9BUR4 548 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 BOCQ9BWV1 1114 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 OSBPL1AQ9BXW6 950 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 FOXP3Q9BZS1 431 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 CEP44Q9C0F1 390 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 VPS16Q9H269 839 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 LIN7BQ9HAP6 207 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 TAB2Q9NYJ8 693 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 RRN3Q9NYV6 651 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 SIRPGQ9P1W8 387 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 PPARGC1AQ9UBK2 798 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 GULP1Q9UBP9 304 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 NOCTQ9UK39 431 aaKnown RBP6.56□□□□□ -1.36
NEDD4-206ENST00000507063 KNTC1P50748 2209 aa6.56□□□□□ -1.36
NEDD4-206ENST00000507063 DOCK4Q8N1I0 1966 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 C2CD4BA6NLJ0 364 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 F8VZ95 297 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 BUB1O43683 1085 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 AP1G1O43747 822 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TMCC1O94876 653 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TNFSF15O95150 251 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PIGNO95427 931 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CYP1A1P04798 512 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CTSBP07858 339 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PLEKP08567 350 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 JUNBP17275 347 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 RFC1P35251 1148 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 EIF4A3P38919 411 aaKnown RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PREPP48147 710 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 DUSP3P51452 185 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TMPRSS3P57727 454 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 SNX16P57768 344 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 BPIFB4P59827 614 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 ERVPABLB-1P60509 514 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CCDC15Q0P6D6 951 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PTP4A2Q12974 167 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 MTA1Q13330 715 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 BECN1Q14457 450 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 POLD3Q15054 466 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CYTH1Q15438 398 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TGIF1Q15583 401 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 FAXCQ5TGI0 409 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 ZCCHC8Q6NZY4 707 aaKnown RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 WDR59Q6PJI9 974 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 GDPD4Q6W3E5 623 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 ZNF783Q6ZMS7 281 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 RD3Q7Z3Z2 195 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 ZSWIM9Q86XI8 627 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 ZNF354CQ86Y25 554 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 DNAAF5Q86Y56 855 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 DCP2Q8IU60 420 aaKnown RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PHACTR4Q8IZ21 702 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PELI3Q8N2H9 469 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 EXD3Q8N9H8 876 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 PLA2G15Q8NCC3 412 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 OR2AP1Q8NGE2 309 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 FAM172AQ8WUF8 416 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CENPIQ92674 756 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 HMCESQ96FZ2 354 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 IL12RB2Q99665 862 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 C11orf70Q9BRQ4 267 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 DUSP23Q9BVJ7 150 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 STK33Q9BYT3 514 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 GANQ9H2C0 597 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 SYNDIG1Q9H7V2 258 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 NLRC4Q9NPP4 1024 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TMEM248Q9NWD8 314 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 APOBEC3BQ9UH17 382 aaKnown RBP6.55□□□□□ -1.36
NEDD4-206ENST00000507063 DCTN4Q9UJW0 460 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 OR1A2Q9Y585 309 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 CSNK1G3Q9Y6M4 447 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 TRPM6Q9BX84 2022 aa6.55□□□□□ -1.36
NEDD4-206ENST00000507063 LOC100289279A0A1B0GTE1 492 aa6.54□□□□□ -1.36
NEDD4-206ENST00000507063 A0A1W2PQM1 296 aa6.54□□□□□ -1.36
NEDD4-206ENST00000507063 A8MX80 341 aa6.54□□□□□ -1.36
NEDD4-206ENST00000507063 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
NEDD4-206ENST00000507063 LMO7DNF2Z398 122 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms